Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0196 |
Symbol | |
ID | 6876146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 186312 |
End bp | 187421 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642788073 |
Product | transposase IS4 family protein |
Protein accession | YP_002218662 |
Protein GI | 198282341 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTGGC GTTGCATGAT GCACAAAGCC AGCGGCAACG CGGGCTTCCA CATTGAAGTA CTGGTGTATT TTGTGCTGGC CATGGTGCTC TATGCCAGCG TGGCTTATGA AGAGGTATTG CAACTGGTCG TCGATGGTTT GCGTCCGCTG CTCGGTGATG ATCGCTTGGC CCAGACCGTC GTCAGCAAGG GGGCCATTTC GCAGGCGCGG GCCAAGGTCG GTGCGGCGCC CTTAAAAACG TTGTATCAGA ATCAGGTTCA GCCCCACGGC CCGTTGGGCA TGGCCGGGGT TGGGTATAAG GGATTACGGC TCATGGCCAT CGATGGCTCG ACGCTGGATA TGCCCGACGA AGCGGCCAAC GCCGAGCGCT TCGGCTATCC GGCATCTTCC CGGGGGAGTG CTGCCTTTCC CCAGTTGCGC TTTGTGGCGA TGGCTGAGTG CGGTACTCAC ACCTTGTGTT ATGCGGAGAT GGGTTCCTAC GAACAGAGTG AGCGGACTCT GGCCGGGCCC GTCATGGCGC ACGCAGACGC GACGATGCTG ATCACAGCAG ACCGCAATTT TTATAGCTAC GCATTCTGGC AGCAGAGCCT GGCTACCGGT GCCCGACTGT TATTCCGCCT CAGCAGCGTC CTGAAGCTAC CTCGGGAAAA AATACTGGCC GATGGATCCT ACCTCAGCAC CATCTATTCG AGCACCCAAG ACCGTAAAAA GGGACGCGGT GGCATTCGAG TACGAATCAT TGAGTATACC CTCGACGGAA TCCCCGATGC GGAACCCAGC TACCGCCTGA TCACCAACTG GATGGATCCA ACCGAAGCGC CGGCCTTGGA GTTGGCGGCA CTGTATCATC GGCGCTGGAC CATTGAATCC AGCCTGGATG AACTCAAAAC CCATCTGGCA GATCGGCAAG TGGTACTCCG CAGCAAGCGC CCCGAGTTGG TAGAACAGGA GTTTTACGCC TTGCTCCTAG CGCATGCGGC GGTCCGCCAT TTAATGACCG AAGCGGCGGA CCAAACCGGA CAAGCCGCTG AAGAACTGTC GTTCATCCAT GCCATTGGTG TACTCCATCG CCGGCTACCC GCCGCTGGCT CTATTCCCCC CTCGGGATAG
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Protein sequence | MPWRCMMHKA SGNAGFHIEV LVYFVLAMVL YASVAYEEVL QLVVDGLRPL LGDDRLAQTV VSKGAISQAR AKVGAAPLKT LYQNQVQPHG PLGMAGVGYK GLRLMAIDGS TLDMPDEAAN AERFGYPASS RGSAAFPQLR FVAMAECGTH TLCYAEMGSY EQSERTLAGP VMAHADATML ITADRNFYSY AFWQQSLATG ARLLFRLSSV LKLPREKILA DGSYLSTIYS STQDRKKGRG GIRVRIIEYT LDGIPDAEPS YRLITNWMDP TEAPALELAA LYHRRWTIES SLDELKTHLA DRQVVLRSKR PELVEQEFYA LLLAHAAVRH LMTEAADQTG QAAEELSFIH AIGVLHRRLP AAGSIPPSG
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