Gene Lferr_0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0196 
Symbol 
ID6876146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp186312 
End bp187421 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content59% 
IMG OID642788073 
Producttransposase IS4 family protein 
Protein accessionYP_002218662 
Protein GI198282341 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTGGC GTTGCATGAT GCACAAAGCC AGCGGCAACG CGGGCTTCCA CATTGAAGTA 
CTGGTGTATT TTGTGCTGGC CATGGTGCTC TATGCCAGCG TGGCTTATGA AGAGGTATTG
CAACTGGTCG TCGATGGTTT GCGTCCGCTG CTCGGTGATG ATCGCTTGGC CCAGACCGTC
GTCAGCAAGG GGGCCATTTC GCAGGCGCGG GCCAAGGTCG GTGCGGCGCC CTTAAAAACG
TTGTATCAGA ATCAGGTTCA GCCCCACGGC CCGTTGGGCA TGGCCGGGGT TGGGTATAAG
GGATTACGGC TCATGGCCAT CGATGGCTCG ACGCTGGATA TGCCCGACGA AGCGGCCAAC
GCCGAGCGCT TCGGCTATCC GGCATCTTCC CGGGGGAGTG CTGCCTTTCC CCAGTTGCGC
TTTGTGGCGA TGGCTGAGTG CGGTACTCAC ACCTTGTGTT ATGCGGAGAT GGGTTCCTAC
GAACAGAGTG AGCGGACTCT GGCCGGGCCC GTCATGGCGC ACGCAGACGC GACGATGCTG
ATCACAGCAG ACCGCAATTT TTATAGCTAC GCATTCTGGC AGCAGAGCCT GGCTACCGGT
GCCCGACTGT TATTCCGCCT CAGCAGCGTC CTGAAGCTAC CTCGGGAAAA AATACTGGCC
GATGGATCCT ACCTCAGCAC CATCTATTCG AGCACCCAAG ACCGTAAAAA GGGACGCGGT
GGCATTCGAG TACGAATCAT TGAGTATACC CTCGACGGAA TCCCCGATGC GGAACCCAGC
TACCGCCTGA TCACCAACTG GATGGATCCA ACCGAAGCGC CGGCCTTGGA GTTGGCGGCA
CTGTATCATC GGCGCTGGAC CATTGAATCC AGCCTGGATG AACTCAAAAC CCATCTGGCA
GATCGGCAAG TGGTACTCCG CAGCAAGCGC CCCGAGTTGG TAGAACAGGA GTTTTACGCC
TTGCTCCTAG CGCATGCGGC GGTCCGCCAT TTAATGACCG AAGCGGCGGA CCAAACCGGA
CAAGCCGCTG AAGAACTGTC GTTCATCCAT GCCATTGGTG TACTCCATCG CCGGCTACCC
GCCGCTGGCT CTATTCCCCC CTCGGGATAG
 
Protein sequence
MPWRCMMHKA SGNAGFHIEV LVYFVLAMVL YASVAYEEVL QLVVDGLRPL LGDDRLAQTV 
VSKGAISQAR AKVGAAPLKT LYQNQVQPHG PLGMAGVGYK GLRLMAIDGS TLDMPDEAAN
AERFGYPASS RGSAAFPQLR FVAMAECGTH TLCYAEMGSY EQSERTLAGP VMAHADATML
ITADRNFYSY AFWQQSLATG ARLLFRLSSV LKLPREKILA DGSYLSTIYS STQDRKKGRG
GIRVRIIEYT LDGIPDAEPS YRLITNWMDP TEAPALELAA LYHRRWTIES SLDELKTHLA
DRQVVLRSKR PELVEQEFYA LLLAHAAVRH LMTEAADQTG QAAEELSFIH AIGVLHRRLP
AAGSIPPSG