Gene Lferr_0189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0189 
Symbol 
ID6876139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp181318 
End bp181959 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content67% 
IMG OID642788066 
ProductMethyltransferase type 11 
Protein accessionYP_002218655 
Protein GI198282334 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.14372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCG CGTCTTATGA CGCCTGGTAC GCTACCGCCC GCGGGCGCTG GATCGGCATG 
GCCGAGTTCC GCCTGCTCTC CAAGCTATTG CAAGCTCGGC GGGGGGATAC GCTCCTGGAC
GTGGGCTGTG GTACCGGGTG GTTCACCCGC CGTTTTGCGG AGGAAGGCCT CCTCGCCAGC
GGTCTGGATC CAAACCCGGA CTGGCTCGCC TTCGCTCAAG TCAAGGGGCC TCCCGCGATC
CGCTGGATCG TGGGGGATGC CCGTGCCCTG CCTTTTCCCG ACCGAGGTTT CGACCGAGTG
GTCTCGGTCG CGGCCTTGTG CTTCGTGGAA GACGAGCGGC AGGCCGTGGC CGAGATCGTG
CGGGTGACGC GCCGGCGTTT CGCCATCGGC TGGCTCAACC GGACGAGCCT GCTCTACAGG
CAGAAGGGCC GGGGCGGTGG AAGCGGCGCC TATCGTGGGA CGCGCTGGCA TCAGCCCCGC
GAAGTGCTCG ACTTCTTCTC CGGACTGAGA GTGCGCCGAC TGGCGGTGCA CTCCGCCATA
TTCCTCCCTT CCGGAAACAG GATGGCGCGG ACGATGGAAC GGGTACTGCC CCATACACTG
CCCTGGGGCG GCCTGGTGGT AATCTCGGGA GAGGTAGGAT AG
 
Protein sequence
MDAASYDAWY ATARGRWIGM AEFRLLSKLL QARRGDTLLD VGCGTGWFTR RFAEEGLLAS 
GLDPNPDWLA FAQVKGPPAI RWIVGDARAL PFPDRGFDRV VSVAALCFVE DERQAVAEIV
RVTRRRFAIG WLNRTSLLYR QKGRGGGSGA YRGTRWHQPR EVLDFFSGLR VRRLAVHSAI
FLPSGNRMAR TMERVLPHTL PWGGLVVISG EVG