| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A5004 |
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| Symbol | |
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| ID | 6874402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 4833287 |
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| End bp | 4834372 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642787871 |
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| Product | putative major fimbrial subunit |
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| Protein accession | YP_002218461 |
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| Protein GI | 198244198 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.170406 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 91 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAGGT TATATCTGGC GCTTATTCTG CTGTTCGCGT ATTCCGGTCA TGGTTACGCC
TCCTGTAAAC GTTCCGGAAA TGAAGGCGCG ATCACTATCA CCCCGCCGTC GCAGCTTGTG
GTGGATAGCC ACGCCTATAC CGCAGGCGAA GTGTTGTGGC AATCGGGCTG GGTTTCCACC
TCCGAAGTCA CAATGGATGG CTGTAGTCGC GATTATAAGG TCGGTTTTTT ATATGAACCC
GGTAGCGCGC AGTCAAATAC ATCAGCGACA ATCAATGCGA ATGACGGGAA CAACACACCG
GTATTTAGCA CCGGCATTTC CGGCGTGGGC ATTGCGATTA AAACCCAAAC GAATGCTGGC
CCTTACGATA ATGTCATGCC AATCGATAAT ACCTACCATA ATGGCGATGG CAATAAAACA
CACCATGCGA TGGCTCCCGC CTACAATGTT GAACTGGTCG CCTTAGGCGG TCCGATCACC
TCCGGTACCG CGACATTCCA AAGCCCACTG GCGCGCGTAT CTTTTCGCGA TAGCGCAACG
GAAGACTCCG GCGGCGATAT CCTGACCCAT CTGTATTTGG GGAATACGCA ATTGATTATG
AAAGCGATGG GATGTCGGGT AGAAACACCT GCCATCACCG TTGATTTAGG CAGCGTCAAT
TTAGGCAGTT TCGCTAACAG TCAAACTGCG GGCACAGGCG AGCAGGATAT CTTATTGACC
TGCGAACAAG GCACCGCTAT TTCCGCATCG TTAAGCGCCC AGCCTGCCAG CGGAAATAAC
CCTGATAATT CAGTCATCCA GTTGAGCAAT GCGAGCGCGC CAACCAGCGC AACCGGCGTT
GGCGTACAGT TGGGTATTCA GGCGCCGGAC GCCGGTTTCT TTACCGACAG TTTGCCAATC
AATCAAAAAA TTGATCTCTT TACTCACACG ATTACCACCA ATGCCGATGG CAGCCAGACG
GTTAGCGGCG GAACCATGAA TATGTCCACC ACCCTGAAAA TTAGCGCGCG CTACTATAAA
ACCGCCGCCA CGGTAACGGC CGGGCAAGCG AATGCCACAG CAACATTAAA CCTGACCTAT
AACTAA
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| Protein sequence | MRRLYLALIL LFAYSGHGYA SCKRSGNEGA ITITPPSQLV VDSHAYTAGE VLWQSGWVST
SEVTMDGCSR DYKVGFLYEP GSAQSNTSAT INANDGNNTP VFSTGISGVG IAIKTQTNAG
PYDNVMPIDN TYHNGDGNKT HHAMAPAYNV ELVALGGPIT SGTATFQSPL ARVSFRDSAT
EDSGGDILTH LYLGNTQLIM KAMGCRVETP AITVDLGSVN LGSFANSQTA GTGEQDILLT
CEQGTAISAS LSAQPASGNN PDNSVIQLSN ASAPTSATGV GVQLGIQAPD AGFFTDSLPI
NQKIDLFTHT ITTNADGSQT VSGGTMNMST TLKISARYYK TAATVTAGQA NATATLNLTY
N
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