Gene SeD_A4989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4989 
Symbol 
ID6875143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4817950 
End bp4818594 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content57% 
IMG OID642787858 
Producthypothetical protein 
Protein accessionYP_002218448 
Protein GI198244326 
COG category[R] General function prediction only 
COG ID[COG3726] Uncharacterized membrane protein affecting hemolysin expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones106 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGCG CAAAACTGAA ATTTCGGCTG CATCGTGCAG TCATTGTATT GTTCTGTCTC 
ACACTGCTCG TCGCGCTTAT GCAGGGCGCG TCCTGGTTTA GTCAAAACCA CCAGCGACAG
CGCAACCCGC AGCTGGAAGA GCTGGCCCGC ACGCTGGCGC GCCAGGTGAC GCTCAACATC
GTCCCGCTGA TGCGCAGCGA AACACCGGAT GAAAATCGCA TCAACGCCGT GCTGCGTCAG
CTCACGCAAG AGAGCCGTAT TCTGGATGCC GGCGTCTATG ATGAACAGGG CGATCTTATT
ACTCGCGCTG GCGAAAGCGT CAATGTGCGC GACAGGCTGG CGCTGGATGG CAAAAAAGCG
GGCAGCTATT TTAACCAACA AATTGTCGAG CCTATCCAGG GGAAAAACGG CCCATTGGGC
TACCTGCGTC TAACGCTGGA TACCCACACG CTGGCCACCG AAGCAAAGCA GGTCGATAAC
ACCACCAACA TTCTACGCCT GATGCTGCTA CTCTCGCTGG CGATAGGCGT GGTGCTGACG
CGCACCTTGC TACAAGGTAA ACGCACCCGC TGGCAGCAGT CGCCCTTCCT GTTAACGGCC
AGCAAGCCTG TTCCGGAAGA GGAAGAGCGT GAGGAAAAAG AGTAA
 
Protein sequence
MARAKLKFRL HRAVIVLFCL TLLVALMQGA SWFSQNHQRQ RNPQLEELAR TLARQVTLNI 
VPLMRSETPD ENRINAVLRQ LTQESRILDA GVYDEQGDLI TRAGESVNVR DRLALDGKKA
GSYFNQQIVE PIQGKNGPLG YLRLTLDTHT LATEAKQVDN TTNILRLMLL LSLAIGVVLT
RTLLQGKRTR WQQSPFLLTA SKPVPEEEER EEKE