Gene SeD_A4888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4888 
Symbol 
ID6871684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp4734065 
End bp4734718 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content56% 
IMG OID642787769 
Producthypothetical protein 
Protein accessionYP_002218362 
Protein GI198242184 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.00826795 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACGATGA ATTATGCCCG GGAGCTGTTT TTCCTGAGGG GAATATTATT TTCTTTTTTT 
TTACCTGGCT GCGCCCGTCC TGTGATTGCG CAGGAGTGGG AGTTCATAAC GCCCTTGGTG 
GCTGATGCCC CCGCCGAGGT GGAACTATTT TCCTTTTACT GTCCGCCCTG CTATGCGTTC 
TCACAGACGA TGGGCGTGGC CCAGGCCATC CGGCACGTAC TGCCGCACGG TGACCGGATG 
ATCAAGTACC ATGTCAACCT GCTGGGCCCC CTCGGCCATG AGCTGACACG GGCCAGGGCG 
CTGGCCATGA TGATGAAGGA AACTGACGTG GTCGAGAAGG CCTTCTTCAT GGCCGACATG 
GTGGAGAAAC GCCTGCATTC CCCGGACGAT GTCCATCGGG TGTTTATGTC TGCCACCGGT 
ATCAGTCGCG GGGAGTATGA CAGAAGTATA AAAAGTCCCG CCGTGAATGA CATGGTGGCA 
TTACAGGAAC GGTTGTTTAA GGAATATGGC GTGAGGGGGA CGCCTTCCGT GTATGTCCGT 
GGCCGTTACC ATATCAACAA TGCCGCCTTC GGTGCATTCT CCGTCGAAGA CTTCAGGAGC 
CGTTATGCCG CGGTGGTCTG GAAACTGCTG GCCGGTAACC CTGATGCCGA CTGA
 
Protein sequence
MTMNYARELF FLRGILFSFF LPGCARPVIA QEWEFITPLV ADAPAEVELF SFYCPPCYAF 
SQTMGVAQAI RHVLPHGDRM IKYHVNLLGP LGHELTRARA LAMMMKETDV VEKAFFMADM 
VEKRLHSPDD VHRVFMSATG ISRGEYDRSI KSPAVNDMVA LQERLFKEYG VRGTPSVYVR 
GRYHINNAAF GAFSVEDFRS RYAAVVWKLL AGNPDAD