Gene SeD_A4886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4886 
Symbol 
ID6875390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4733470 
End bp4733820 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content56% 
IMG OID642787767 
Productputative GerE family regulatory protein 
Protein accessionYP_002218360 
Protein GI198245166 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.00651447 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGTCTG CTTTGACCGT TTTCCCGGAA GACGGGGACA TCAACCGGAT ATGGTACGAT 
CGGTTTTGTA TCGAATTTAA CAGCGACGGC GGACTGAGTC CGGCTGAACT GCGGGTTATC
CGACTGCTGC TGCAGGGCTA TAACTGCGGG CAGATTGCTG CCCTCTGTTT TCGCAGCGTC
AAAACCATTT CAGCCCAGAA AGTTCTGGCT TTCAGGCGCC TCGGCGTCAG GAATGATGCC
ACCCTGTTGC CAACCCTGAT GCTTCTGGGG ATGGTGACAC TGTATACCGA CCTGAACCGG
TGTCATTCAC TGGAGGAGGG CGGCCCGGAA TGTGGGTCGG AAGCCGGATA A
 
Protein sequence
MASALTVFPE DGDINRIWYD RFCIEFNSDG GLSPAELRVI RLLLQGYNCG QIAALCFRSV 
KTISAQKVLA FRRLGVRNDA TLLPTLMLLG MVTLYTDLNR CHSLEEGGPE CGSEAG