Gene SeD_A4685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4685 
Symbol 
ID6872302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp4546435 
End bp4547220 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content52% 
IMG OID642787584 
Productproline/betaine transporter 
Protein accessionYP_002218182 
Protein GI198243505 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.668519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAAA GGAAAAAAAT AAAACCGATT ACACTGGGCG ATGTGACCAT CATTGATGAT 
GGTAAACTTC GCAAAGCGAT TACCGCCGCC TCGCTGGGCA ACGCGATGGA GTGGTTTGAT 
TTTGGTGTTT ATGGATTTGT TGCCTACGCG TTGGGTAAAG TCTTTTTCCC CGGCGCCGAT 
CCCAGCGTCC AGATGATTGC CGCGCTGGCC ACGTTTTCCG TTCCCTTCCT GATTCGTCCG 
CTCGGCGGGT TATTCTTTGG TATGCTCGGC GATAAATACG GGCGCCAGAA GATCCTGGCG 
ATCCCGGCCT TCATCCTGAT TAACAGTAAC GTTATTGGCC TGATTTTTGC CGGTTTGTTG 
ATGCTGGCGG TGATTCTGAA CTGCTTTACC GGGGTGATGG CCTCGACATT GCCGGCGATG 
TTTCCGACGC ATATTCGTTA CAGCGCGCTG GCGGCGGCTT TTAATATCTC TGTATTGATT 
GCCGGTCTGA CGCCAACGCT GGCGGCCTGG CTGGTGGAAA GCTCGCAGGA TCTGATGATG 
CCGGCGTATT ATTTGATGGT CATCGCGGTG ATAGGCTTGA TTACCGGTAT TTCCATGAAA 
GAAACGGCCA ATCGTCCGTT AAAAGGCGCA ACGCCAGCGG CGTCGGACAT CCAGGAAGCG 
AAGGAAATTC TGGGCGAGCA TTACGATAAT ATTGAGCAGA AAATCGACGA CATCGATCAG 
GAAATTGCGG AGCTGCAGGT CAAACGTTCG CGTCTGGTAC AGCAACATCC GCGTATCGAT 
GAATAA
 
Protein sequence
MLKRKKIKPI TLGDVTIIDD GKLRKAITAA SLGNAMEWFD FGVYGFVAYA LGKVFFPGAD 
PSVQMIAALA TFSVPFLIRP LGGLFFGMLG DKYGRQKILA IPAFILINSN VIGLIFAGLL 
MLAVILNCFT GVMASTLPAM FPTHIRYSAL AAAFNISVLI AGLTPTLAAW LVESSQDLMM 
PAYYLMVIAV IGLITGISMK ETANRPLKGA TPAASDIQEA KEILGEHYDN IEQKIDDIDQ 
EIAELQVKRS RLVQQHPRID E