Gene SeD_A4636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4636 
Symbol 
ID6873796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp4478021 
End bp4479331 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content52% 
IMG OID642787539 
Productconjugative transfer protein 
Protein accessionYP_002218137 
Protein GI198244460 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.403008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value0.321234 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAAAA ACGTCAAACT TTCACTGATT GCTATCGCGG TCTCGCTTTT TATGGCAAAG 
CAGGCGAGCG CCGCCAATAC CTGGACGGAA GCGCGTAATG ACGCAATGGG CGGGACGGGC 
GTTGCGTCCG CGAATTATGG CAGCGGAGTA CTATTAAATC CGGCGTTACT GGCAAAAGCC 
AAACCGGAAG ACAATATCAC TGTTGTCCTT CCTGCGGTCG GCGTCCAGAT TACGGATAAA 
GACAATCTCC AGGATGAAAT TGACGATATC AGCGATAAAG TGGATTACTA CGATGAGGTC 
GTCGATAACC TTACGCTGGG GCAAATTCTG CTCAATCCGC GAGGCGTGCT GAATCAATTT 
CAGGGCGCCG CGCGCGACCT GGCCGATGAG CTGGAATATC TCAACGGAAA AACCGCCCGC 
GCCAATGCCG GCGCCGGGTT GGCGGTAAGT ATTCCAGGGC AAACGCTTTC CGTGGCGTTT 
ATCGCCAAAG GTTATGCGCA TGGGCGCGTG AGTTCGTCCA TTGATCAGAA CGATATTCAG 
TATCTGCGCG ATATCCAGCA TGATGAACGT GTCGCGCTTC GTGAAGCAGG ACGCGCTGCT 
TTGCTGGGGT CTGACGAAAT TACAAAGCAT TTAAACTCTA CCGCGTCGGG GCGGGTAGCG 
ATTGTGTCTG ACTACGGTAT TGCACTGGCG AAGCAGTTTG TGGTGGGCGA GGTGCCTGTT 
TCCATTGGCG TTACGCCAAA ACTGCAAAAA ACCTGGCTCT ATAACTACAC CACCTCAATT 
TATAACTACG ACAGTAGCGA CTGGAATAGC AGCCGTTATC GCAATGACGA TACGGGTTTT 
AACATTGATG CGGGGCTTGC TGCCGATATC GGTGAAAACT GGACGTTGGG GCTGAGCGGG 
CAAAATCTGG TATCTCGCGA TATCGATACG AAAGATATTT ACATCACTAA TGGTATGACG 
GGAGAAACCA CCAACTACAA AGATACATAC CAAATCCGCC CCCTGGTTAC CGCGGGCGTC 
GCATGGCATA ACGATTTGCT GACCGTAAGC GCCGATGGCG ATCTGACGGA AACGAAAGGC 
TTTAAGAGCG AAGACAATTC ACAGTACGTT GGCGTCGGCG CTGAAGTTCG ACCGTTATCA 
TGGCTGGCGG TGCGCGCAGG GTATCGTGCG GATGTGAAAA ATAACGATAG CAATGTGGTT 
ACCGGCGGTC TTGGCTTTGC GCCCTTTAAC CGTGTGCATC TCGATTTAAT GGGACTGTAC 
GGCGAAGATG AAACCTGGGG GGCAGGCGCG CAGCTTACGA TGACATTCTG A
 
Protein sequence
MNKNVKLSLI AIAVSLFMAK QASAANTWTE ARNDAMGGTG VASANYGSGV LLNPALLAKA 
KPEDNITVVL PAVGVQITDK DNLQDEIDDI SDKVDYYDEV VDNLTLGQIL LNPRGVLNQF 
QGAARDLADE LEYLNGKTAR ANAGAGLAVS IPGQTLSVAF IAKGYAHGRV SSSIDQNDIQ 
YLRDIQHDER VALREAGRAA LLGSDEITKH LNSTASGRVA IVSDYGIALA KQFVVGEVPV 
SIGVTPKLQK TWLYNYTTSI YNYDSSDWNS SRYRNDDTGF NIDAGLAADI GENWTLGLSG 
QNLVSRDIDT KDIYITNGMT GETTNYKDTY QIRPLVTAGV AWHNDLLTVS ADGDLTETKG 
FKSEDNSQYV GVGAEVRPLS WLAVRAGYRA DVKNNDSNVV TGGLGFAPFN RVHLDLMGLY 
GEDETWGAGA QLTMTF