Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4503 |
Symbol | |
ID | 6873110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 4340381 |
End bp | 4341238 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642787418 |
Product | MscS Mechanosensitive ion channel |
Protein accession | YP_002218029 |
Protein GI | 198242223 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGGTT TTGAGTTATT TCCAAAAATT AAAGGCGCGA TCAAATGGAT GGCCGAGCAC AGTGACTCGG TAATTCATTT TGGCTGGAAT GTTGTTGCCG CCATCATTCT ACTTTTCATC GGTAAGTTAA TAGCTCGCTT ACTATCGAGG GGGCTGGAAA AATTACTTCT CAGGCGGCAA GTGGATGCCA CTATTGTCCA CTTTTTCTCC GCGCTGGTTC GCTACATCAC GATAGCTTTC ACGGCAGTAG CCGCTCTTGG CCGTGTCGGT ATAGAAACCT CCTCAATTAT TGCCGTTATC GGCGCGGCGG GTTTAGCCAT TGGTCTGGCG CTGCAAGGGG CACTTTCCAA CTTTGCCGCA GGCGTACTGC TTGTCTCCCT GCGTCCTTTC CGCGCCGGGG AAATTGTACA AATTGGCCTG GTTATCGGCA CAGTAGAAAA GGTCCATATT TTCTCCACCA CTCTGCTCAC TGCGGATAGC AAAGAAGTTG TCATCCCGAA TGGTAAAATT ATTGCTGATA ATATTATCAA CTATTCACGA CACCCCTATC GACGTATTGA TCTGATTATT GGCGTGGATT ACCAAAGCCG TATTGCTGAC GTAAAAAGCG TGATACATCG TATTATTGAA CAAGATCATC GCATTGATAA AACCCGCGAT ATTGCGGTCC GCCTGGGCGA ACTTGCGCCC TCTAGCCTGA ATTTCTATGT TCGCGTATGG GTGCCCAACG CTCAGTACTG GAGTACTTAC TACGATCTTC TGGAAAATAT CAAGGAAGCG ATGGATGAAA ACGGCATCAA TATTCCTTAC CCCCGGATGG ATGTCCGGGT TGAGAATGTA AAAAGCATCA CGCCATAA
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Protein sequence | MEGFELFPKI KGAIKWMAEH SDSVIHFGWN VVAAIILLFI GKLIARLLSR GLEKLLLRRQ VDATIVHFFS ALVRYITIAF TAVAALGRVG IETSSIIAVI GAAGLAIGLA LQGALSNFAA GVLLVSLRPF RAGEIVQIGL VIGTVEKVHI FSTTLLTADS KEVVIPNGKI IADNIINYSR HPYRRIDLII GVDYQSRIAD VKSVIHRIIE QDHRIDKTRD IAVRLGELAP SSLNFYVRVW VPNAQYWSTY YDLLENIKEA MDENGINIPY PRMDVRVENV KSITP
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