Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4441 |
Symbol | rhaA |
ID | 6873309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 4283004 |
End bp | 4284263 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642787359 |
Product | L-rhamnose isomerase |
Protein accession | YP_002217970 |
Protein GI | 198245581 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4806] L-rhamnose isomerase |
TIGRFAM ID | [TIGR01748] L-rhamnose isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 86 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACTC AACTGGAACA AGCCTGGGAA CTGGCAAAAC AACGTTTCGC CGCAGTAGGT ATTGATGTCG AGGAGGCGCT GCGCCAGCTC GATCGCCTGC CGGTTTCCAT GCACTGCTGG CAGGGCGACG ATGTTGCCGG ATTCGAGAAC CCGGAAGGTT CGTTGACGGG CGGAATTCAG TCGACCGGCA ACTATCCGGG CAAAGCGCGT AACGCCACCG AACTGCGCGC CGATCTGGAA CAGGCGCTGC GTCTGATCCC AGGACCAAAA CGGCTGAACC TGCACGCCAT TTACCTTGAG TCGGATACGC CGGTTGCTCG CGACCAGATC AAACCGGAGC ATTTTAAAAA CTGGGTGGAG TGGGCGAAAG CGAACCGGCT GGGGCTGGAT TTCAACCCCA CCTGTTTTTC TCATCCACTG AGCGCTGACG GTTTTACCCT CTCTCATCCA GACGCGAAAA TTCGCCAGTT CTGGATCGAT CACTGCAAAG CCAGCCGCCG CGTCTCGGCA TACTTTGGTG AGCAGCTCGG TACGCCGTCG GTGATGAACA TCTGGATTCC GGACGGCATG AAAGACATTA CCGTCGACCA TTTAGCCCCG CGCCAGCGCC TGCTGGAAGC GCTGGATGAG GTCATTAGCG AGAAATTCGA CCCGGCGCAC CACATCGACG CCGTTGAGAG CAAACTGTTT GGCATCGGCG CGGAAAGCTA CACCGTCGGC TCCAATGAGT TCTACATGGG CTACGCCACC AGCCGTCAGA CCGCGCTGTG CCTGGATGCG GGCCACTTCC ATCCCACCGA AGTGATTTCC GACAAAATTT CCGCCGCCAT GCTCTACGTA CCACGGCTGC TGCTGCACGT CAGCCGCCCG GTACGCTGGG ATAGCGACCA CGTGGTACTC CTGGACGATG AAACCCAGGC AATTGCCAGC GAAATCGTCC GTCATAACCT GTTCGACCGT GTGCATATCG GCCTGGATTT CTTCGACGTC TCTATCAACC GTGTCGCCGC GTGGGTTATC GGTACCCGCA ACATGAAAAA AGCGCTGCTG CGCGCTCTGC TGGAACCCAC AGATCAACTG CGTCAGCTTG AGGCCAGCGG TGATTACACC GCGCGTCTGG CGCTGCTGGA AGAGCAAAAA TCTCTGCCGT GGCAGGCCGT CTGGGAAATG TATTGCCAGC GTCACGACAC GCCAGTTGGC AGCCAGTGGC TGGACAGTGT TCGCGCCTAC GAAAAAGAGA TCCTGAGCAA ACGTAGATGA
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Protein sequence | MTTQLEQAWE LAKQRFAAVG IDVEEALRQL DRLPVSMHCW QGDDVAGFEN PEGSLTGGIQ STGNYPGKAR NATELRADLE QALRLIPGPK RLNLHAIYLE SDTPVARDQI KPEHFKNWVE WAKANRLGLD FNPTCFSHPL SADGFTLSHP DAKIRQFWID HCKASRRVSA YFGEQLGTPS VMNIWIPDGM KDITVDHLAP RQRLLEALDE VISEKFDPAH HIDAVESKLF GIGAESYTVG SNEFYMGYAT SRQTALCLDA GHFHPTEVIS DKISAAMLYV PRLLLHVSRP VRWDSDHVVL LDDETQAIAS EIVRHNLFDR VHIGLDFFDV SINRVAAWVI GTRNMKKALL RALLEPTDQL RQLEASGDYT ARLALLEEQK SLPWQAVWEM YCQRHDTPVG SQWLDSVRAY EKEILSKRR
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