Gene SeD_A4157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4157 
Symbol 
ID6875221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp4003300 
End bp4003977 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content51% 
IMG OID642787094 
Producthypothetical protein 
Protein accessionYP_002217720 
Protein GI198244236 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.926737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.782611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCCTT ATATTTTGAA TTTACTGGCC GCTATGCTGT TGGGCGCGCT GATTGGCGCG 
GAAAGACAAT GGCGTCAACG TATGGCGGGA TTACGCACTA ATGCGCTGGT GGCGACAGGC 
GCCGCCGTTT TTATTCTGAG CTCCATGACG ACATCGCCAG ACAGCCCCGG GAGAATTGCG 
GCGCAGATTG TCTCTGGTAT TGGCTTTCTG GGGGCGGGCG TCATCATGCG CGAAGGGATG 
AATGTGCGCG GGCTGAACAC TGCGGCAACG CTATGGTGTT CGGCGGGCAT CGGCGTGTTA 
TGCGGCTTAG GGCAGTTCAA AAATGCGCTG GCGGCGACGA TCATTATTCT TTGCGCCAAT 
ATTTTACTGC GTGAAGCGGC GCAGCGTATA AATCAACTCC CGGTATCCGC CGAGGGAGAA 
AAACGTTATA TCCTGAAAGT AACCTGTAAT AAAGAAGATG AAAGCGAGGT TCGTCAGTGG 
TTACTGAATA TCGTAAAAGA GGCCGCGATC TGTTTACAAG GGTTAGGTTC GGTCCCCGCT 
CAGGAACAGG GCTATAAAGA AATTCGTGCC GAGCTCGTGG GTCATGCTGA TTATCGTAAA 
ACGCGAGAAC TGATTATATC CAGAATAGGT GATAACGATA ATATCACCGC AATTCACTGG 
AGCATTGATA GTCAATAA
 
Protein sequence
MFPYILNLLA AMLLGALIGA ERQWRQRMAG LRTNALVATG AAVFILSSMT TSPDSPGRIA 
AQIVSGIGFL GAGVIMREGM NVRGLNTAAT LWCSAGIGVL CGLGQFKNAL AATIIILCAN 
ILLREAAQRI NQLPVSAEGE KRYILKVTCN KEDESEVRQW LLNIVKEAAI CLQGLGSVPA 
QEQGYKEIRA ELVGHADYRK TRELIISRIG DNDNITAIHW SIDSQ