Gene SeD_A4041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4041 
Symbol 
ID6870948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3884633 
End bp3884986 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content51% 
IMG OID642786990 
ProductyiaA/B two helix domain-containing protein 
Protein accessionYP_002217617 
Protein GI198242267 
COG category[S] Function unknown 
COG ID[COG4682] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.550863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.0976535 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATC ACGTTGCGCG CAGGAAACGG ATATTCGGCC TGGGAATGTT AGTTGTCGGT 
GCAGTGGTAT ACCTGGTGGG ACTGTGGCCA GGCTGTCATA CATTAAGCGA AAAGGGATAT 
TTTTTTGCGG CAATCGTCAT GTGTGGTTTT CCAGTCTTAA TTCGCCAGGA ACACACGGGA 
AATGGCCGCT TGCTTTCTCG TTGCAAATCT TTGCTGTTGC TTGGCATCGG CATGGTCGCG 
GTCGGCGTAT TTAACCTGGC GCTGGCGGGC GCGCTGAAAA TACTGTGTCT GGTGGCGCTG 
GGGGTCAGTA TATATGGAAC CGATCTTTAC GCTTCCTACA GTGATGATGA ATGA
 
Protein sequence
MDDHVARRKR IFGLGMLVVG AVVYLVGLWP GCHTLSEKGY FFAAIVMCGF PVLIRQEHTG 
NGRLLSRCKS LLLLGIGMVA VGVFNLALAG ALKILCLVAL GVSIYGTDLY ASYSDDE