| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3991 |
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| Symbol | |
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| ID | 6875494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 3831489 |
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| End bp | 3833495 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642786947 |
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| Product | putative phosphodiesterase |
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| Protein accession | YP_002217575 |
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| Protein GI | 198242458 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.185818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCGTCA GCCGCTCGTT AACAATTAAA CAGATGGCAA TGGTTGCGGC CGTTGTCATG
GTGTTTGTTT TTGTCTTTTG CACCGTTTTG TTGTTCCATC TGGTACAGCA GAACCGCTAC
AACACGGCTA CGCAACTGGA AAGCATCGCG CGATCTGTTC GGGAACCTCT TTCTTCCGCG
ATTTTAAAAG CGGATCTCCC CGGCGCGGAA ACCATTCTGG AAAGTATTAA ACCTGCGGGC
GTGGTGAGTC GCGCCGATGT GGTATTGCCG AATCAGTTCC AGGCGTTGCG TAAGCGCTTC
ATTCCTGAAC GCCCCGTCCC GGTTATGGTG ACGCGTCTCT TCGAACTGCC GGTACAAATT
TCTTTGCCGG TTTATTCGCT GGAGCGTCCC GCCAATCCGC AACCGCTGGC CTACCTTGTA
TTGCAGGCGG ATTCGTACCG TATGTACAAG TTCGTCATGA GCGCGCTCTC TACGTTAGTG
ACCATTTACT TACTTTTATC GCTGATCCTG ACGGTGGCCA TCGCCTGGTG CGTAAACCGC
CTGATTGTGC ATCCGCTGCG CAAAATCGCC CGCGAGCTGA ACGACATTCC GCAGCAGGAG
CTGATCGGAC ATCAGCTGGC GTTGCCGCGT CTGCATCAGG ATGATGAAAT TGGAATGCTG
GTGCGCAGCT ATAACCTCAA CCAGCAGCTT ATGCAGCGTC AACGCGAGGA GCAAACGGAC
AACGCGATGC GTTTTCCGGT TTCCGAGCTG CCCAATAAAG CCTTTTTAAT GGCATTGCTG
GAACAGGTTA TCGCCCGCCA ACAGACCACC GCGCTTATCA TCGTGACGTG CGAAACGTTG
CGTGACACGG CAGGCGTGCT GCAAGAAACG CAGCGGGAGA TTCTATTACT GACGCTGGTT
GAGAAGCTGA AGTCGGTGCT GGCGCCGCGC ATGGTGCTTA CGCAGGTCAG CGGGTATGAC
TTCGCCATTA TCGCCCACGG CGTTAAAGAG CCGTGGCACG CCATCACATT AGGTCAGCAA
ATACTCACTA TCATTAATGA ACGACTGCCC ATCCAGGGTA TTCAACTGCG CCCAAGCTGC
AGTATTGGCA TTGCGATGTA TTATGGCGAT CTGACCGCCG AAGCGCTCTA TGGTCGCGCC
GTTTCCGCCG CGTTTACCGC GCGCCGAAAA GGTAAAAATC AGATCCAGTT CTTTGACCCG
GCGCAGATGG AGGCCGCTCA ACAGCGCCTT ACCGAAGAGA GCGATATCCT TACCGCGCTG
GATAACCATC AGTTTGCCAT TTGGTTGCAG CCGCAGGTCG AGATGCGCAG CGGCAACGTA
TTAAGCGCCG AAGCCTTGTT ACGTATGCAA CAGCCGGACG GTAGCTGGGA ATTGCCGGAG
GGGCTGATTG AGCGCATTGA ATCCTGCGGC CTGATGGTCA CGGTGGGCCA TTGGGTGCTG
GAAGAGTCCT GCCGCCAGCT TGCCGCCTGG CAGGAGCGCG GCGTGACATT GCCGCTCTCC
GTCAATCTTT CCGCGTTACA GCTCATGCAC CCTGGCATGG TGTCGGATCT GCTGGAATTG
TTAAATCGCT ATCGTATTCA ACCGGGTACG CTGATTCTTG AGGTCACTGA AAGCCGCCGT
ATCGACGATC CGCACGCTGC CGTCGCTATC TTACGTCCGT TACGTAATGC TGGCGTGCGT
ATCGCACTGG ATGATTTTGG CATGGGTTAC GCGGGGCTGC GCCAGTTACA GCATATGAAG
TCGCTACCGG TCGATATCCT TAAAATTGAT AAAATGTTTG TCGATGGGTT ACCGGATGAT
CACAGTATGG TGACGGCGAT TATTCTGATG GCCCGCAGTC TTAATTTACA ATTGATTGCC
GAGGGCGTGG AGAACGAGGC GCAACGCGCG TGGCTGGAAC AGGCGGGAGT CAACGTCGCG
CAAGGCTTCC TGTTTGCTCG GCCCGTTCCC GCGGATATCT TTGAAGAACG GTATCTGTCG
CACGAAAATT CTGATTACAA AAGTTAA
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| Protein sequence | MRVSRSLTIK QMAMVAAVVM VFVFVFCTVL LFHLVQQNRY NTATQLESIA RSVREPLSSA
ILKADLPGAE TILESIKPAG VVSRADVVLP NQFQALRKRF IPERPVPVMV TRLFELPVQI
SLPVYSLERP ANPQPLAYLV LQADSYRMYK FVMSALSTLV TIYLLLSLIL TVAIAWCVNR
LIVHPLRKIA RELNDIPQQE LIGHQLALPR LHQDDEIGML VRSYNLNQQL MQRQREEQTD
NAMRFPVSEL PNKAFLMALL EQVIARQQTT ALIIVTCETL RDTAGVLQET QREILLLTLV
EKLKSVLAPR MVLTQVSGYD FAIIAHGVKE PWHAITLGQQ ILTIINERLP IQGIQLRPSC
SIGIAMYYGD LTAEALYGRA VSAAFTARRK GKNQIQFFDP AQMEAAQQRL TEESDILTAL
DNHQFAIWLQ PQVEMRSGNV LSAEALLRMQ QPDGSWELPE GLIERIESCG LMVTVGHWVL
EESCRQLAAW QERGVTLPLS VNLSALQLMH PGMVSDLLEL LNRYRIQPGT LILEVTESRR
IDDPHAAVAI LRPLRNAGVR IALDDFGMGY AGLRQLQHMK SLPVDILKID KMFVDGLPDD
HSMVTAIILM ARSLNLQLIA EGVENEAQRA WLEQAGVNVA QGFLFARPVP ADIFEERYLS
HENSDYKS
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