Gene SeD_A3616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3616 
Symbol 
ID6871329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3471442 
End bp3472485 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content55% 
IMG OID642786599 
Productgalactitol-1-phosphate dehydrogenase 
Protein accessionYP_002217235 
Protein GI198242780 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAG TGGTTATTCA CGCTGAGGGA GACGTGCGCG TTGAAGAACG TCCCTTACCA 
CAACTGCAAG CCGAGGACGA TGTGTTGGTC AAAGTCGTTA GCTCAGGGCT TTGCGGGTCG
GATATCCCGC GTATTTTCGC GCAGGGCGCC CATTATTATC CTATTACGTT AGGCCATGAA
TTCAGCGGCT ACGTTGAATC CTACGGCACA GGCGTAACGG ATATGCAGCC TGGCGATGCC
GTCGCTTGTG TCCCGCTTCT TCCCTGCTTT CACTGTCCGC AATGCGAACG CGGTTACTTT
TCTTTATGCA AACAGTATCA GTTTGTAGGA TCGCGCAGCG AAGGCGGTAA TGCGGAATAT
GTGGTGGTCA AACGGGCCAA TCTTTTCCGC TTGCCGTCTG ATATGCCGAT TGAAGATGGC
GCGTTTATCG AACCAATTAC CGTGGGCTTA CACGCCTTTC ATCTGGCGCA GGGCTGCGAG
GGGAAAAACG TAATTATCGT TGGTGCCGGG ACAATTGGCC TGCTGGCCTT ACAGTGCGCG
CGGGAACTGG GCGCGCGAAG CGTAACGGCG ATTGATATCA ATCCGCAGAA ACTGGAACTT
GCGAAAGCGC TCGGCGCAAC GCATACCTGT AATAGCCGGG AAATGACCGC CGACGACATC
CAGACCGCGT TGTCCGACAT TCAGTTTGAT CAACTGGTTC TCGAAACGGC AGGAACTCCC
CAGACCGTCT CGCTGGCTAT CGATATCGCC GGGCCGCGCG CGCAACTGGC GCTGGTGGGG
ACGTTACATC AGGATCTCAC CCTGACAACG CGTACATTCG GGCTAATTTT GCGTAAAGAG
CTCACGCTCC TCGGCAGTTG GATGAACTAC TCCGCGCCAT GGCCAGGAGA AGAATGGGAA
ACCGCAGCGC GCCTGTTGGC TGAAAAACGT CTTCAACTGA CCCCTCTCAT TGCCCATCGC
GGCGATGCGG AAAGCTTTGC AGAAGCAGTC AAAGCGCTTA ATGGCGCGCC CATGCAGGGC
AAAATCCTAC TTCAACTTTC CTGA
 
Protein sequence
MKSVVIHAEG DVRVEERPLP QLQAEDDVLV KVVSSGLCGS DIPRIFAQGA HYYPITLGHE 
FSGYVESYGT GVTDMQPGDA VACVPLLPCF HCPQCERGYF SLCKQYQFVG SRSEGGNAEY
VVVKRANLFR LPSDMPIEDG AFIEPITVGL HAFHLAQGCE GKNVIIVGAG TIGLLALQCA
RELGARSVTA IDINPQKLEL AKALGATHTC NSREMTADDI QTALSDIQFD QLVLETAGTP
QTVSLAIDIA GPRAQLALVG TLHQDLTLTT RTFGLILRKE LTLLGSWMNY SAPWPGEEWE
TAARLLAEKR LQLTPLIAHR GDAESFAEAV KALNGAPMQG KILLQLS