| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3613 |
|---|
| Symbol | |
|---|
| ID | 6873437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 3469242 |
|---|
| End bp | 3469706 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642786596 |
|---|
| Product | PTS system galactitol-specific transporter subunit IIA |
|---|
| Protein accession | YP_002217232 |
|---|
| Protein GI | 198243741 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.397916 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 75 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAC TATTTGTCCG AACCGGAATC ACATTCGACT CGAGCCAACA GGCGCTGGCG
CACATTGGCA AAGAGATGCT GGCGAAAGGC GTGGTGCATG ATAGTTATCC GCAGGCGCTG
GTGGAACGTG AAGCGTCTTT TCCTACCGGC ATTGCGCTGG AGCGTCACGC CGTCGCTATC
CCTCATTGCG AGGCGGTTCA TGCGAAATCA CCCGCTATCT ATCTGATTCG TCCAGATAAG
CCGGTCATGT TTCAACAGGC GGATGATGAC GAAGAGATTG CCGTTTCGTT AATCATCGCC
TTAATCGTTG AAAACCCGGC GGCACAGCTA AAACTTCTGC GCCGCCTGTT TAGTGAGCTA
CAGAACCCGA GCACCCTCGA TGCCCTGTTA AGCGCGCCGG ATGCCGAACT GGCGATACGC
TTTCAGGAAA CCATCCTTGA GCCTGAGCAG TGCGTCCAGG TTTGA
|
|---|
| Protein sequence | MSQLFVRTGI TFDSSQQALA HIGKEMLAKG VVHDSYPQAL VEREASFPTG IALERHAVAI
PHCEAVHAKS PAIYLIRPDK PVMFQQADDD EEIAVSLIIA LIVENPAAQL KLLRRLFSEL
QNPSTLDALL SAPDAELAIR FQETILEPEQ CVQV
|
|---|
| |