Gene SeD_A3470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3470 
Symbol 
ID6871839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3332474 
End bp3333973 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content52% 
IMG OID642786464 
Productamino acid permease 
Protein accessionYP_002217101 
Protein GI198245135 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.202942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAAA ACAGACTTGC CAGCCATCTT GAACGTGGCG TTATTGGTTT CCCCACGACG 
CTTGCCAGCT CCGTCGGGCT GATTATGGCA AGCCCGGTGA TCCTGACCGT GACCAGTGGT
TTTGGCTCAG GGGGAGATAC CTTTGCCCTT GCGGTATTAC TGGCATTTAT TATGATGCAA
GCGCAGATTA CCACCTTTGC CGAAGCGGCA ACGCTCATTC CCACGACTGG CTCCGTCTAC
GACTATATCT CCTGCGGGAT GGGGCGTTTT TTCGCTATCA CCGGTGCGCT TTGCGCTTAC
CTGATCGTAC ACATTTTTGC CGGCACGGCA GAAACGATTC TCGCTGGCGT CATGGCGCTG
GTGAACTTTG AGTCTGTTAG CGAACACGTG GCCATGCAGC ACAATACCTG GATGGTTGGC
GTCGGCATGG TAGTGGTTTT CGGGATACTG AATGCCATTG GTGTTGAAGT ATTTGGCAAG
GTGGAAGTGT TTCTTACATT CGGTATGTGG ACTACCCTGA CCATCTTCGG TTTATGCGGG
ATCCTGTTAT CCCCGGTCAC TCATCATTCC GGGTGGTTTG GCGCACCGCT TGATGTCAGT
AATCTTTCTG GTCTGTTTGG TTATATTGGC ATGGCGATGT TTATGTTCGT CGGTTGTGAA
CTGGTCACGC CAATGGCGCC GGAAATTAAA AAAGCGCATC GTACGATTCC CAGAGCGATG
GCGCTTGGCC TTTTAGCGGT GGCAGGTTGT ATGTTCCTCT ATGGCGCTGC GATTAACCGG
CAGGTAAATA ATGTGGTGGT CGATGCGGCA AACCATATCT TTTTACTGGA TACGCCGATG
GCTATTCCCG CCTTTGCCAA TCGTGTCATG GGACATGTCG GGCAATACTG GCTGGGCGTG
GGGTTGTTGT TAGCGGGATG TGCGACGATT AATACGCTAA TGGCGGCAGT ACCGCGTATG
ATATACGGCA TGGCGCTGGA CGGCGCTTTG CCGCGGTTTC TGACCTGGTT GCACCCCCGC
TTTAAAACAC CGGTCATCGC CATCGCATTC GGTGTTGCGA TTCCCTGTTT ACATGCCTGG
TATCTGAACG GTGATATCGA CCACATTGTT CCGCTGATCC TCGCTGCGGT CTGCGCCTGG
GGAGTAGCTT ATCTGCTGGT AACGTTATCG GTCGTTATCT TACGTATTCG GCGCCCCGAT
TTACCACGCG CTTACCGGGC CCCCTGGTTT CCCTTACCTC AGATTATTTC GAGCGTGGGT
ATTATTATCG CCATTATTAA TATCGCGCCT CCAGGAATGA ACAGTCGGGA TGTACTTATA
CCATTCGGTA TTATGCTTGG ATTGACTGCC GCCTATGCCT TATTCTGGAC ATTATGTGTG
CAACGGGTTA ATCCTTTCCT CCCGCTTCCG GTAGAAGAGG TCGTGGAACG GGCTATGGGC
AATTATGAAA AGCGAAACAA TGAAGAGATG ACGCCAGATG TCCTCCGTCC CCTGGTTTAA
 
Protein sequence
MFKNRLASHL ERGVIGFPTT LASSVGLIMA SPVILTVTSG FGSGGDTFAL AVLLAFIMMQ 
AQITTFAEAA TLIPTTGSVY DYISCGMGRF FAITGALCAY LIVHIFAGTA ETILAGVMAL
VNFESVSEHV AMQHNTWMVG VGMVVVFGIL NAIGVEVFGK VEVFLTFGMW TTLTIFGLCG
ILLSPVTHHS GWFGAPLDVS NLSGLFGYIG MAMFMFVGCE LVTPMAPEIK KAHRTIPRAM
ALGLLAVAGC MFLYGAAINR QVNNVVVDAA NHIFLLDTPM AIPAFANRVM GHVGQYWLGV
GLLLAGCATI NTLMAAVPRM IYGMALDGAL PRFLTWLHPR FKTPVIAIAF GVAIPCLHAW
YLNGDIDHIV PLILAAVCAW GVAYLLVTLS VVILRIRRPD LPRAYRAPWF PLPQIISSVG
IIIAIINIAP PGMNSRDVLI PFGIMLGLTA AYALFWTLCV QRVNPFLPLP VEEVVERAMG
NYEKRNNEEM TPDVLRPLV