| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3420 |
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| Symbol | speB |
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| ID | 6872134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 3286612 |
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| End bp | 3287532 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642786417 |
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| Product | agmatinase |
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| Protein accession | YP_002217055 |
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| Protein GI | 198246071 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
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| TIGRFAM ID | [TIGR01230] agmatinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.0247827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCACCT TAGGTCATCA GTACGATAAC TCACTGGTTT CTAATGCGTT TGGTTTTTTA
CGTCTGCCAA TGAACTTCCA GCCGTATGAC AGCGATGCCG ACTGGGTGAT CACTGGCGTA
CCGTTTGATA TGGCAACGTC CGGTCGCGCT GGCGGCCGTC ATGGCCCGGC GGCGATCCGT
CAGGTGTCGA CCAACCTCGC CTGGGAACAT CACCGTTTCC CGTGGAGTTT TGACATGCGC
GAGCGCCTGA ACGTCGTGGA CTGCGGCGAT TTGGTGTATG CGTTTGGCGA TGCCCGTGAG
ATGAGTGAAA AATTACAGGC GCACGCTGAA AAACTGCTGT CTGCAGGCAA GCGTATGCTC
TCTTTCGGCG GCGACCACTT CGTCACGCTG CCGCTGCTGC GCGCCCACGC GAAACATTTT
GGCAAAATGG CGCTGGTACA TTTTGATGCG CATACCGATA CCTACGCTAA CGGCTGCGAA
TTCGATCACG GCACGATGTT CTACACCGCG CCGAAAGAAG GCCTGATCGA TCCGCATCAT
TCGGTACAGA TCGGTATTCG TACTGAGTTT GACAAAGACA ATGGCTTTAC CGTGCTGGAT
GCCTGCCAGG TCAACGATCG CGGCGTGGAT GATATTCTCG CTCAGGTGAA ACAGATCGTC
GGCGATATGC CGGTCTATCT GACCTTTGAT ATCGACTGTC TGGACCCGGC GTTTGCGCCT
GGCACCGGTA CGCCGGTGAT CGGCGGTTTG ACCTCCGATC GCGCCATTAA ACTGGTACGC
GGTCTGAAAG ATCTGAACAT TGTCGGTATG GATGTAGTGG AAGTCGCGCC GGCTTACGAT
CAGTCGGAGA TCACCGCTCT GGCGGCCGCG ACGCTGGCAT TAGAAATGCT CTATATCCAG
GCGGCGAAGA AAGGCGAGTA A
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| Protein sequence | MSTLGHQYDN SLVSNAFGFL RLPMNFQPYD SDADWVITGV PFDMATSGRA GGRHGPAAIR
QVSTNLAWEH HRFPWSFDMR ERLNVVDCGD LVYAFGDARE MSEKLQAHAE KLLSAGKRML
SFGGDHFVTL PLLRAHAKHF GKMALVHFDA HTDTYANGCE FDHGTMFYTA PKEGLIDPHH
SVQIGIRTEF DKDNGFTVLD ACQVNDRGVD DILAQVKQIV GDMPVYLTFD IDCLDPAFAP
GTGTPVIGGL TSDRAIKLVR GLKDLNIVGM DVVEVAPAYD QSEITALAAA TLALEMLYIQ
AAKKGE
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