Gene SeD_A3415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3415 
Symbol 
ID6875007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3281420 
End bp3282127 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content59% 
IMG OID642786413 
ProductABC transporter permease 
Protein accessionYP_002217051 
Protein GI198245390 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.119505 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCCGT TTACCTCGTT AACCTTATGG GCGTTGGCGG CCTGCACCAC GCTGCTACTC 
CCTGCGCAGA CCGTGCTCCC GGTTTATAGC GCGGCGGCCT TCCTCTGTCT GCTGGCGCTG
AAATCAACGC GGCGGCGGGC GAAGTATGTC GCCTGGCTGA TGCTGTCTTT AGGGTTTGGG
CTATGGCTGG TACATGGCGG TTGGCTAACG GAATGGATAA GCGGGCAGCC TTGCGATCCG
CAGCGCTGGA TATATGCCGT TACGCTATGG CTACGCCTGC TGGCGATCGT GTCGACGTCG
CAGCTATGGA TGCAGTATGT GCCGGTTCAG CGGTTTATTC GCGCCCTGTT CGCTTCACGT
TTGCCGCCCG ACATCGCTTA CCTGTTCGCT GGCCCGCTGC TGGTCGTCGA ACAGCTCAAA
CGACAACTGA CGATCGTTCA TGAAGCCCAG CGCGCGCGTG GCGTACCGCT GGATGAAGGC
TGGTATCAGC GGCTACGGGC AATGCCTGCG CTGATCGTGC CGCTTACGCA AAATGCGCTT
AACGATCTGA CAATACGCGG CGCGGCGTTG GATATGCGGG GGTTTCGGCT GCATCGAGCC
CGAACCACGC TGTGGGCGCC GAAAGATAGC ATGTTACAAC GGGTTGCGCG GTATGGCATG
GTACTGCTAA TACTGGCGGA AGCGGGAGTG TGGATATGGT TACGTTAG
 
Protein sequence
MHPFTSLTLW ALAACTTLLL PAQTVLPVYS AAAFLCLLAL KSTRRRAKYV AWLMLSLGFG 
LWLVHGGWLT EWISGQPCDP QRWIYAVTLW LRLLAIVSTS QLWMQYVPVQ RFIRALFASR
LPPDIAYLFA GPLLVVEQLK RQLTIVHEAQ RARGVPLDEG WYQRLRAMPA LIVPLTQNAL
NDLTIRGAAL DMRGFRLHRA RTTLWAPKDS MLQRVARYGM VLLILAEAGV WIWLR