Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3415 |
Symbol | |
ID | 6875007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 3281420 |
End bp | 3282127 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642786413 |
Product | ABC transporter permease |
Protein accession | YP_002217051 |
Protein GI | 198245390 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 0.119505 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCCGT TTACCTCGTT AACCTTATGG GCGTTGGCGG CCTGCACCAC GCTGCTACTC CCTGCGCAGA CCGTGCTCCC GGTTTATAGC GCGGCGGCCT TCCTCTGTCT GCTGGCGCTG AAATCAACGC GGCGGCGGGC GAAGTATGTC GCCTGGCTGA TGCTGTCTTT AGGGTTTGGG CTATGGCTGG TACATGGCGG TTGGCTAACG GAATGGATAA GCGGGCAGCC TTGCGATCCG CAGCGCTGGA TATATGCCGT TACGCTATGG CTACGCCTGC TGGCGATCGT GTCGACGTCG CAGCTATGGA TGCAGTATGT GCCGGTTCAG CGGTTTATTC GCGCCCTGTT CGCTTCACGT TTGCCGCCCG ACATCGCTTA CCTGTTCGCT GGCCCGCTGC TGGTCGTCGA ACAGCTCAAA CGACAACTGA CGATCGTTCA TGAAGCCCAG CGCGCGCGTG GCGTACCGCT GGATGAAGGC TGGTATCAGC GGCTACGGGC AATGCCTGCG CTGATCGTGC CGCTTACGCA AAATGCGCTT AACGATCTGA CAATACGCGG CGCGGCGTTG GATATGCGGG GGTTTCGGCT GCATCGAGCC CGAACCACGC TGTGGGCGCC GAAAGATAGC ATGTTACAAC GGGTTGCGCG GTATGGCATG GTACTGCTAA TACTGGCGGA AGCGGGAGTG TGGATATGGT TACGTTAG
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Protein sequence | MHPFTSLTLW ALAACTTLLL PAQTVLPVYS AAAFLCLLAL KSTRRRAKYV AWLMLSLGFG LWLVHGGWLT EWISGQPCDP QRWIYAVTLW LRLLAIVSTS QLWMQYVPVQ RFIRALFASR LPPDIAYLFA GPLLVVEQLK RQLTIVHEAQ RARGVPLDEG WYQRLRAMPA LIVPLTQNAL NDLTIRGAAL DMRGFRLHRA RTTLWAPKDS MLQRVARYGM VLLILAEAGV WIWLR
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