Gene SeD_A3414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3414 
Symbol 
ID6875595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp3280841 
End bp3281419 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content57% 
IMG OID642786412 
Productsignal transduction histidine kinase, LytS 
Protein accessionYP_002217050 
Protein GI198245551 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.0817227 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGTC GCCCGTTTTC CAGCCAGTCT CTGGTGCTGA TTGTCATCGC TATTGCCATC 
AATATGATTG GCGGACAGCT TATTAGCATG TTGAAGCTGC CTATTTTTCT CGACTCGATC 
GGCACCTTAA TTAGCGCGGT ACTGTTAGGG CCGTTCATCG GCATGTTGAC TGGGCTTCTG 
ACCAACTTGC TGTGGGGGCT GCTTACCGAC CCTATCGCTG CCGCGTTTGC CCCGGTAGCG 
ATGGTTATCG GTCTGGTCGC CGGGTGGCTG GCGCGCGCAG GCTGGTTTCG TACCCTGCCC 
AAAGTGATCG TCAGCGGGGT CGTCATTACG TTGGCGGTGA CGCTGGTCGC CGTACCGCTT 
CGTACCGCGC TTTTTGGCGG CGTTACCGGT AGCGGCGCTG ATTTGTTCGT CGCCTGGATG 
CATTCAATGG GCCAAAACCT GGTGGAGTCA GTCGCGATTA CCGTCATAGG CGCTAATCTG 
GTCGATAAAA TTCTGACGGC GATCATCGTT TGGGTGCTGC TGCGTCAGCT ACCGTTACGT 
ACGACACGGC ATTTTCCTGC GATGTCAGCC GTACGCTAA
 
Protein sequence
MARRPFSSQS LVLIVIAIAI NMIGGQLISM LKLPIFLDSI GTLISAVLLG PFIGMLTGLL 
TNLLWGLLTD PIAAAFAPVA MVIGLVAGWL ARAGWFRTLP KVIVSGVVIT LAVTLVAVPL 
RTALFGGVTG SGADLFVAWM HSMGQNLVES VAITVIGANL VDKILTAIIV WVLLRQLPLR 
TTRHFPAMSA VR