Gene SeD_A3364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3364 
Symbol 
ID6874345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3238884 
End bp3239465 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content52% 
IMG OID642786368 
Productfimbrial protein 
Protein accessionYP_002217007 
Protein GI198243703 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.364607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAATA AAATAATACT TGCCATGGCG GCTGCCGGTA TGATGTATGG CGCTTCTGTA 
TATGCAGTCG ATCCACCCAC AGCAGGCCCG TTCGGCTCAG GTAAAATTAC CTTCACTGGT
ACCATCACCA ACTCCCCCTG TGATATCGCA CCGGGCGACG ATGCGATCAC CGTTCCGTTT
GGACAGATTT CTTACCGTAA ACTGAATACC GCCGACGCAA CTACGGAATC AAAACCGTTC
ACCATTCATC TACAGAACTG TGCTTTCGAT CCGAATACCC CGGACACAGC TGGCTCCGCA
GGGAAAATGT CCAAAGTAAC CGTATCTTTC TCTGGCGCAG CGAATACCAG CAAAAAGGCT
TACACCACCA GCGGTATCGC ACAGCATGTT GGTGTCCAGC TACTGAAGAG TGACAACGCC
ACAATTATCG ATCCCAACAC CCCGATGCCG GATGGCGACG CTCAGCAACT GCAGGCCGGA
AACAACGAAC TCAACTTCTT TGCCCGACTA ATAGCACTGG ATAATGGCGT CACTCCCGGT
GACTTCAACG CATCCGTCAC CTACACCCTG AAATACCTGT GA
 
Protein sequence
MRNKIILAMA AAGMMYGASV YAVDPPTAGP FGSGKITFTG TITNSPCDIA PGDDAITVPF 
GQISYRKLNT ADATTESKPF TIHLQNCAFD PNTPDTAGSA GKMSKVTVSF SGAANTSKKA
YTTSGIAQHV GVQLLKSDNA TIIDPNTPMP DGDAQQLQAG NNELNFFARL IALDNGVTPG
DFNASVTYTL KYL