Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3362 |
Symbol | |
ID | 6872790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3235491 |
End bp | 3236234 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642786366 |
Product | pili assembly chaperone protein |
Protein accession | YP_002217005 |
Protein GI | 198244309 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0478294 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAAACA GCAGAAGAAG CCGTGTGATT TTACTCGCAC TGGCGGCAGC ATGGAGCCAG TACAGCCCGG CGGCCGTCAA TGTTGACCGG ACCCGTATTA TCATGGATGC GCCGCAGAAA ACGGTGGCCA TCACGCTGAA TAACGATGAC AAAACCACGC CGTTCCTGGC GCAGTCCTGG GTGACGGACG CTGACGGGGT GAGAACCGAT GCGCTGATGG CGCTGCCGCC GCTGCAGCGT ATTGATGCCG GACAGAAATC CCAGGTCCGC ATCACCCAGG TTCGCGGGCT GACAGATAAG CTCCCTCAGG ACAGGGAAAC ACTGTTCTGG TTTAACGTGC GGGGCGTTCC CCCGAAGCCA GAAGACGACA ACGTTCTGCA ACTGGCCATG CAGAGCCAGC TGAAACTGTT TTACCGTCCG AAAGCCATTA TCAGAAGCAG CAGTGACCAG CCGGAAAGAA AGCTGACTGC TGAGCGGAAT GCGGGACATC TGACCCTCAG AAACCCGACG CCGTACTACA TCACTGTGGC GTGGCTGGGA GCAGACCGTA GCCACAGGCT CAGCGGTTTC CGCGAGGGCG TGATGGTACC GCCCCTGGGG AACCTGCCTT TAAAGGCTGT TCTGCCGGCA GAAACCCGGA CGCTGTGGGT GGGGTATATT GATGATTACG GGGGACTGCA GATGAATCGC TACACCTGCG ATGCCCTGAA CTGCGCGTTT AAGGACGCAG GGGCGACATC ATGA
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Protein sequence | MKNSRRSRVI LLALAAAWSQ YSPAAVNVDR TRIIMDAPQK TVAITLNNDD KTTPFLAQSW VTDADGVRTD ALMALPPLQR IDAGQKSQVR ITQVRGLTDK LPQDRETLFW FNVRGVPPKP EDDNVLQLAM QSQLKLFYRP KAIIRSSSDQ PERKLTAERN AGHLTLRNPT PYYITVAWLG ADRSHRLSGF REGVMVPPLG NLPLKAVLPA ETRTLWVGYI DDYGGLQMNR YTCDALNCAF KDAGATS
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