Gene SeD_A3353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3353 
Symbol 
ID6870949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3228706 
End bp3229569 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content55% 
IMG OID642786357 
ProductLysR family transcriptional regulator 
Protein accessionYP_002216996 
Protein GI198245790 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.686915 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTACT CACCTGAAGC GTTAATGGCA TTTGTTGAGA CCGTCTCTTG CGGTTCGTTT 
TCTGCGGCGG CGCGCCGCCT GCGTAAAAGC CAGTCCACCA TTAGTACCGC CATTGCGCAT 
CTGGAGGCGG ATCTGGGATT TTCATTATTT GATCGATCAT CGCGCCAGCC CGTTCTGACC 
GAAGAAGGAA AACGGGTGCT TAGCTATGTT CAGGCTATTT TATCGGCGAG CGACCGCCTG 
GATGAGGTGG CGCTGACGTT ATCCGGCGAG ACGGAGGCAA GGCTCACGTT CGTCCTCTCT 
GATACCCTGT ACCCTGACAG TCTGGAAGAG TTAATGGCGC AGTTTGATCG TCAATTTCCG 
CATACCGAGT TTGAATGTTT GATCGGAGAA AATGATGATG TCATCGACCT GCTGCAAAAA 
GGGCGCGCCC AGATAGGACT GATTGAAGCG CGTGATGACT ATCCCACAGA CATTGGCGCG 
ACGCGTCTGC CTGTTCAAAG CTGGATGGGG GTTTATGTGG CGACCACGCA TCCGTTGGCG 
TCGCAGACGA ACCTGCAATG GGAGCAACTG CATACCTGGC GCGAGCTGCG TCTGAATACC 
TACCTTGAAT CTAACGTCAA CATTACGCGC GGCCCGGCCT GGTCAGCGCC AAACTATTTA 
TTGCTGTTGA GCATGGCGGT TCAGGGATTT GGCTGGTGCG TATTGCCCTG CGCGCTGGTG 
GAAGAGTTTG CGGCGGAAAA ACCGCTGGCG CAGCTGGATG TTCCTGGCTG GCCGAGGGCG 
ATTGCTATTG ATTTGTTGTG GAACAAGAAG ACGCCGCCCG GAACGGCGGG GAACTGGCTT 
CGCTACCATT TACAGCAGAA ATAA
 
Protein sequence
MRYSPEALMA FVETVSCGSF SAAARRLRKS QSTISTAIAH LEADLGFSLF DRSSRQPVLT 
EEGKRVLSYV QAILSASDRL DEVALTLSGE TEARLTFVLS DTLYPDSLEE LMAQFDRQFP 
HTEFECLIGE NDDVIDLLQK GRAQIGLIEA RDDYPTDIGA TRLPVQSWMG VYVATTHPLA 
SQTNLQWEQL HTWRELRLNT YLESNVNITR GPAWSAPNYL LLLSMAVQGF GWCVLPCALV 
EEFAAEKPLA QLDVPGWPRA IAIDLLWNKK TPPGTAGNWL RYHLQQK