| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3167 |
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| Symbol | hypD |
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| ID | 6873551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 3045748 |
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| End bp | 3046869 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642786188 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_002216829 |
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| Protein GI | 198242116 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 0.54116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTTG TTGACGAGTA CCGTGCGCCG GAACAGGTAA TGCAGCTCAT TGAACACCTG
CGTGAACGCG CCGCCCTTCT TCCTTACACT GCCGAACGTC CGTTGCGCAT TATGGAAGTC
TGCGGGGGTC ATACCCACGC AATTTTTAAA TTTGGTCTCG ATCAGTTACT GCCCGAAAAC
GTGGAATTTA TTCACGGCCC CGGTTGTCCG GTCTGCGTGC TGCCGATGGG ACGCATCGAC
AGTTGCGTGG AAATCGCCAG CCATCCGGAG GTGATTTTCT GCACCTTTGG CGATGCCATG
CGCGTGCCGG GGAAACAGGG TTCTCTGTTG CAGGCTAAAG CGCGCGGCGC GGATGTCCGT
ATTGTTTACT CTCCGATGGA CGCGCTGAAG CTGGCGCAGG ATAACCCGAC CCGCAAAGTG
GTATTTTTCG GGCTGGGCTT TGAAACCACC ATGCCGACCA CCGCCATCAC GCTGCAGCAG
GCAAAACAGC GTGGCGTGCG AAACTTCTAC TTTTTCTGCC AGCACATTAC GCTGATCCCG
ACGCTGCGTA GCCTACTGGA GCAGCCGGAC AACGGCATTG ACGCCTTTCT TGCGCCAGGC
CACGTCAGCA TGGTCATCGG CACCGAGGCG TACCAGTTTA TCGCCGCCGA TTTTAATCGC
CCGCTGGTGG TGGCTGGATT CGAACCGCTT GATCTACTGC AAGGCGTGGT CATGCTGGTT
GAGCAGAAAA TAGCGGCCCT AAGCCAGGTT GAAAACCAAT ACCGTCGCGT GGTGCCGGAT
GCCGGAAACA TGCTGGCGCA GCAGGCCATC GCCGATGTGT TCTGCGTTAA TGGCGACAGC
GAGTGGCGCG GTCTGGGCGT GATTGAATCC TCCGGCGTCC ACCTGACGCC AGAGTATCAG
CGCTTTGACG CCGAAGCGCA TTTCCGCCCA GCGCCACAAC AGGTCTATGA CGATCCGCGC
GCCCGCTGCG GCGAAGTGCT GACCGGCAGA TGCAAGCCGC ATCAGTGCCC GCTATTTGGT
AAAACATGTA ATCCAGAGAC CGCGTTCGGC GCGCTGATGG TCTCTTCCGA AGGCGCATGC
GCCGCCTGGT ATCAGTATCG TCAGCAGGAG TGTGAAGTTT GA
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| Protein sequence | MRFVDEYRAP EQVMQLIEHL RERAALLPYT AERPLRIMEV CGGHTHAIFK FGLDQLLPEN
VEFIHGPGCP VCVLPMGRID SCVEIASHPE VIFCTFGDAM RVPGKQGSLL QAKARGADVR
IVYSPMDALK LAQDNPTRKV VFFGLGFETT MPTTAITLQQ AKQRGVRNFY FFCQHITLIP
TLRSLLEQPD NGIDAFLAPG HVSMVIGTEA YQFIAADFNR PLVVAGFEPL DLLQGVVMLV
EQKIAALSQV ENQYRRVVPD AGNMLAQQAI ADVFCVNGDS EWRGLGVIES SGVHLTPEYQ
RFDAEAHFRP APQQVYDDPR ARCGEVLTGR CKPHQCPLFG KTCNPETAFG ALMVSSEGAC
AAWYQYRQQE CEV
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