Gene SeD_A3085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3085 
Symbol 
ID6871327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp2979284 
End bp2980261 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content57% 
IMG OID642786113 
Producttricarboxylic transport 
Protein accessionYP_002216759 
Protein GI198244631 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC AATTACTTCG TACCCTTACT GCAAGCATTT TATTAATGAG TACCTCTGTT 
CTGGCGCAGG AGGCGCCGTC GCGAACGGAA TGTATCGCGC CAGCCAAACC TGGCGGCGGT 
TTCGACCTCA CCTGTAAGCT GATTCAGGTG AGTTTGCTGG AGACTGGCGC TATCGAGAAA 
CCCATGCGGG TAACGTATAT GCCCGGCGGC GTCGGCGCTG TGGCCTATAA CGCGATAGTC 
GCTCAACGCC CTGGCGAACC CGGGACTGTG GTCGCCTTTT CCGGCGGTTC GCTGCTCAAC 
CTGTCGCAGG GGAAATTTGG TCGCTACGGC GTGGATGATG TGCGCTGGCT GGCAAGCGTG 
GGCACTGATT ACGGCATGAT CGCCGTGCGT GCGGATTCCC CGTGGAAAAC GCTGAAAGAT 
CTGATGACGG CGATGGAAAA AGATCCCAAC AGCGTGGTCA TTGGCGCTGG CGCCTCTATT 
GGCAGCCAGG ACTGGATGAA GTCGGCGTTG CTGGCGCAAA AGGCGAACGT CGACCCGCAC 
AAGATGCGCT ACGTTGCCTT TGAGGGCGGC GGCGAGCCGG TGACGGCATT AATGGGCAAC 
CATGTTCAGG TTGTCTCCGG CGATCTCAGT GAAATGGTGC CTTATCTGGG CGGCGACAAA 
ATCCGCGTGC TTGCCGTCTT TTCAGAAAAT CGTCTGCCGG GCCAGCTTGC CAATGTCCCT 
ACCGCTAAAG AACAGGGCTA CGACCTGGTG TGGCCGATTA TTCGCGGCTT CTACGTCGGG 
CCCAAAGTCA GCGATGCCGA TTACCAGTGG TGGGTGGATA CCTTCAAGAA GCTCCAGCAA 
ACCGACGAGT TTAAAAAGCA GCGCGATCTG CGCGGCCTGT TTGAGTTCGA CATGACCGGC 
CAGCAGCTCG ATGACTACGT GAAAAAACAG GTTACTGATT ACCGTGAACA GGCGAAAGCC 
TTCGGACTCG CGAAATAA
 
Protein sequence
MKKQLLRTLT ASILLMSTSV LAQEAPSRTE CIAPAKPGGG FDLTCKLIQV SLLETGAIEK 
PMRVTYMPGG VGAVAYNAIV AQRPGEPGTV VAFSGGSLLN LSQGKFGRYG VDDVRWLASV 
GTDYGMIAVR ADSPWKTLKD LMTAMEKDPN SVVIGAGASI GSQDWMKSAL LAQKANVDPH 
KMRYVAFEGG GEPVTALMGN HVQVVSGDLS EMVPYLGGDK IRVLAVFSEN RLPGQLANVP 
TAKEQGYDLV WPIIRGFYVG PKVSDADYQW WVDTFKKLQQ TDEFKKQRDL RGLFEFDMTG 
QQLDDYVKKQ VTDYREQAKA FGLAK