Gene SeD_A3065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3065 
Symbol 
ID6871646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp2954594 
End bp2954998 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content41% 
IMG OID642786094 
Productphage repressor protein cI 
Protein accessionYP_002216740 
Protein GI198242560 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGCGT GTGAGAACGA AGAAAGAAAT CTCAAAAACG AAACCTCCGT CACGGTAAGA 
CCACTTTCTA AAATTGTTGC TCCTAGCATC AAACATGTTG AACTGAAGAA CGGTGAACTG 
CAGCCAAGTG ATGAAATTCT TCTTGATAGC AGACTGCTCG ATGGTGACTC ATCCAACTCT 
TTATTTGTAA AAACAGCTAC TGATAGCTTT GTTGTGGATA CGTCTGTTAA ACAAGTCAGT 
AATGGCTTCT GGTTAGTCGA TATGGACGGA GTTAAAAGCA TCGTCAAAAT CGCTCGCATT 
CCAGGCAACA AAATTGTAGT TCACCAAGAT GAAACATCAT TTGAATGCTC GGTCGACGAC 
ATTGAAGCTA TCGGGCGTGC AGTCAAAGTA ATCAAGAGCC TCTAA
 
Protein sequence
MYACENEERN LKNETSVTVR PLSKIVAPSI KHVELKNGEL QPSDEILLDS RLLDGDSSNS 
LFVKTATDSF VVDTSVKQVS NGFWLVDMDG VKSIVKIARI PGNKIVVHQD ETSFECSVDD 
IEAIGRAVKV IKSL