Gene SeD_A3053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3053 
Symbol 
ID6874633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2945199 
End bp2946359 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content35% 
IMG OID642786083 
Producthypothetical protein 
Protein accessionYP_002216729 
Protein GI198242255 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0782167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.0469245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATG TAAATGTTCA ACAAATTCTA ACAGAGCAAA ATGACGAGAT TGAGATTGAG 
ATTGAGATTG AGAATGAAAT TGAGCCTTAT GAACATATAA AAGAGCGTAA GGTTGTTATT 
CAGCCATATG ATTATGCGGT ACGAACTCTT GTTGATATGA TAATTGAAGG GGATTTAATT 
CTTGAGCCTG ATTATCAAAG GAAATATCAA TGGGATGATA TTAAAGCGTC AAGGTTTATT 
GAATCGATAG CTTTAAATAT ACCTGTGCCA GTTGTGTATT TGGCTGAGGA AAAAGATGGT 
ACATTTAGTG TCATTGATGG ACAACAGCGA TTGACATCCT TGTTCCGCTT TATTAAAGCT 
AACGAGATTG AGAATTTATT CCCAGACTCA GGATTGATGC CATTAAAGCT AACTGGGTTA 
AAAATAATCT CAGAAATAAA TGGTAAAGAA TATCTTGAGT TAGATCGTGT ATTAAGATCT 
AATATTGCGA AAAGAGCTAT TAGGTGCATT GTTGTTCTCA ATGAATCAGA TGAGGCTTTA 
AAGTTTGAAG TATTTGAACG CTTAAATACA GGGAGTGCAT CGCTCTCTGA TCAAGAAGTT 
CGTAATTGTG TATATCGAGG TAGTTATAAT GAACTACTGA AAAAATTGGC ACAATATGAT 
AAATTCGTTG AGTTGATTTC GCTGCCTGAG CAAGATGCTA AGTCAATGAA GGCTGTTGAG 
TTAGTGTTGC GCTTCTTAGC GTATAGAGAA TTATCAGCGT CTTCTGATTA CTCAGATAAC 
TACTCTGAGT ATTTGAATTT ACATATGGAG GAAAATCGCG AAATTTCTAC AGCAAGAGCA 
GAAAGTGTTA CCTCTCTTTT TTATGGAACT GTTGACTTAA TTCACGATGT GTTAGGTCCA 
GGTATTGCTT TTAGAAAACC CAAAGATCAA ACAGATCCAA GTAAAGGGTA TTTTCAAAAT 
AGAATTAATG GCTCTATTTA TGAATCACAA ATGGTTGCTT TTTCCAGAGC ATTTGAACAG 
GGGAAAAAGG AAGATCTTGC AGTTAAGGCA TTTAGTGTGT TTAAAAATGA AGGCTATTGG 
AAAACCTTAT TCCAAGGGAC TTCAAAAAAG AACTCGGCAT TGAATAGAAG TACAATTCTT 
ACTGAGGCAT TAATGGGGTA A
 
Protein sequence
MTDVNVQQIL TEQNDEIEIE IEIENEIEPY EHIKERKVVI QPYDYAVRTL VDMIIEGDLI 
LEPDYQRKYQ WDDIKASRFI ESIALNIPVP VVYLAEEKDG TFSVIDGQQR LTSLFRFIKA 
NEIENLFPDS GLMPLKLTGL KIISEINGKE YLELDRVLRS NIAKRAIRCI VVLNESDEAL 
KFEVFERLNT GSASLSDQEV RNCVYRGSYN ELLKKLAQYD KFVELISLPE QDAKSMKAVE 
LVLRFLAYRE LSASSDYSDN YSEYLNLHME ENREISTARA ESVTSLFYGT VDLIHDVLGP 
GIAFRKPKDQ TDPSKGYFQN RINGSIYESQ MVAFSRAFEQ GKKEDLAVKA FSVFKNEGYW 
KTLFQGTSKK NSALNRSTIL TEALMG