Gene SeD_A2649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2649 
SymbolmenE 
ID6874317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2532825 
End bp2534192 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content61% 
IMG OID642785716 
ProductO-succinylbenzoic acid--CoA ligase 
Protein accessionYP_002216373 
Protein GI198244798 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID[TIGR01923] O-succinylbenzoate-CoA ligase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.479728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTCA CGGATTGGCC GTGGCGCCAC TGGCGTCAGG TTCGCAGTCA GGCGCCCGCT 
CTGCGCCTGA ACGATGAAGT GCTAAGCTGG CGCGCCCTCT GTGAGCGTAT TGATGCGCTG
GCGGGCGGGT TTGCCGCGCA GGGCGTACGC GAGGGCGACG GTGTCCTGCT GCGCGCCGGG
AATCAGCCGC GCACTCTGTT GGCATGGCTT GCGCTGATGC AGTGCGGCGC GCGGGTTCTG
CCCGTCAATC CGCAGTTGCC CCAGACGTTG CTGGAGGCGC TGGTGCCGAA GTTAACGCTG
CGTTTTGCGC TGACACTGGA AGGCGAAAAC GCGTTTTCCG GATTAACCGC GTTGCAGATA
CAAAAGAGCA CAGCGGCGTA TGCTGTGGAC TGGCAACCGC AGCGTCTGGT TTCCATGACG
CTGACATCGG GTTCCACAGG ATTGCCAAAA GCGGCTGTAC ATACGTGCCA GGCGCATCTT
GCCAGCGCGC AGGGGGTGCT TTCGCTAATG CCGTTTGGCC CTCAGGATGA CTGGCTGCTA
TCGCTGCCGC TGTTTCATGT ATCCGGGCAG GGTATTATGT GGCGTTGGCT CTTCGCCGGG
GCGCGCATGA CGGTACGCGA TAAGCAACCG CTGGAGCAGA TGCTGGCAGG GTGTACTCAT
GCTTCGCTGG TGCCGACGCA GCTGTGGCGG CTGCTGGCGA ATCGGGCGGC GGTGACGCTG
AAAGCCGTTT TGCTCGGCGG CGCGGTGATT CCGGTTGAAC TCACCGACCA GGCCAGCAAA
CAAGGGATTC GCTGCTGGTG CGGGTATGGG CTCACGGAGT TCGCGTCTAC AGTATGCGCC
AAGGAGGCCG ATGGTTCTGA TGATGTGGGC GCGCCGCTCC CCGGCAGAGA GATCAGAATC
GTCGATAATG AAGTCTGGCT GCGCGCCGCC AGTATGGCGG AAGGTTACTG GCGTGATGGC
AAACTGATCC CGCTGGTTAA TGACGAGGGC TGGTTTGCCA CGCGCGATCG CGGCGATCTG
AACCACGGCA GGCTAACCAT CGCCGGGCGG CTGGACAACC TGTTCTTTAG CGGCGGCGAA
GGCATTCAGC CGGAGGAAGT CGAACGCGTT ATTAATGCGC ATCCGCTAGT GCAACAAGCC
TTCGTCGTGC CGGTAGAAGA TAAAGAGTTT GGCCATCGTC CCGTTGCGGT TGTGGAGTAT
GCATCGCAGG CCGGAGACGT GAACCTCGCT GAATGGGGCC GCGATAAGTT GGCGCGTTTT
CAGCAGCCGG TTCGCTGGTT GACGCTGCCG TCAGAACTGA AAAACGGAGG GATTAAAATA
TCTCGCCGTG CGCTCCAGCA GTGGGTGTGT GAGAACTGTA AAAATTAA
 
Protein sequence
MTFTDWPWRH WRQVRSQAPA LRLNDEVLSW RALCERIDAL AGGFAAQGVR EGDGVLLRAG 
NQPRTLLAWL ALMQCGARVL PVNPQLPQTL LEALVPKLTL RFALTLEGEN AFSGLTALQI
QKSTAAYAVD WQPQRLVSMT LTSGSTGLPK AAVHTCQAHL ASAQGVLSLM PFGPQDDWLL
SLPLFHVSGQ GIMWRWLFAG ARMTVRDKQP LEQMLAGCTH ASLVPTQLWR LLANRAAVTL
KAVLLGGAVI PVELTDQASK QGIRCWCGYG LTEFASTVCA KEADGSDDVG APLPGREIRI
VDNEVWLRAA SMAEGYWRDG KLIPLVNDEG WFATRDRGDL NHGRLTIAGR LDNLFFSGGE
GIQPEEVERV INAHPLVQQA FVVPVEDKEF GHRPVAVVEY ASQAGDVNLA EWGRDKLARF
QQPVRWLTLP SELKNGGIKI SRRALQQWVC ENCKN