| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2582 |
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| Symbol | |
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| ID | 6873900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 2462025 |
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| End bp | 2464391 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642785656 |
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| Product | hypothetical protein |
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| Protein accession | YP_002216313 |
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| Protein GI | 198245144 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.0480731 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTTTC ATATTGGAAG CGGATGTCTT CCCGCCACCA TCAGTAATCG CCGCATTTAT
CGTATTGCCT GGTCTGATAC CCCCCCTGAA ATGAGTTCCT GGGAAAAAAT GAAGGAATTT
TTTTGCTCAA CGCACCAGAC TGAAGCGCTG GAGTGCATCT GGACGATTTG TCACCCGCCG
GCCGGAACGA CGCGGGAGGA TGTGGTCAGC AGATTTGAAC TGCTCAGGAC GCTCGCGTAT
GCCGGATGGG AGGAAAGCAT TCATTCCGGC CAGCACGGGG AAAATTACTT CTGTATTCTG
GATGAAGACA GTCAGGAGAT ATTGTCAGTC ACCCTTGATG ATGCCGGGAA CTATACCGTA
AATTGCCAGG GGTACAGTGA AACACATCGC CTCACCCTGG ACACAGCACA GGGTGAGGAG
GGCACAGGAC ACGCGGAAGG GGCATCCGGG ACATTCAGGA CATCCTTCCT CCCTGCCACA
ACGGCTCCAC AGACGCCAGC AGAGTATGAT GCTGTCTGGT CAGCGTGGAG AAGGGCTGCA
CCCGCAGAAG AGTCACGCGG CCGTGCAGCA GTGGTACAGA AAATGCGTGC CTGCCTGAAT
AATGGCAATG CAGTGCTTAA CGTGGGAGAA TCAGGTCTTA CCACCTTGCC AGACTGTTTA
CCCGCGCATA TTACCACACT GGTTATTCCT GATAATAATC TGACCAGCCT GCCGGCGCTG
CCGCCAGAAC TGCGGACGCT GGAGGTCTCT GGTAACCAGC TGACTAGCCT GCCGGTGCTG
CCGCCAGGAC TACTGGAACT GTCGATCTTT AGTAACCCGC TGACCCACCT GCCGGCGCTG
CCGTCAGGAC TATGTAAGCT GTGGATCTTT GGTAATCAAC TGACCAGCCT GCCGGTGTTG
CCGCCAGGGC TACAGGAGCT GTCGGTATCT GATAACCAAC TGGCCAGCCT GCCGGCGCTG
CCGTCAGAAT TATGTAAGCT GTGGGCCTAT AATAACCAGC TGACCAGCCT GCCGACGTTG
CCGTCAGGGC TACAGGAGCT GTCGGTATCT GATAACCAAC TGGCCAGCCT GCCGACGCTG
CCGTCAGAAT TATATAAGCT GTGGGCCTAT AATAATCGGC TGACCAGCCT GCCGGCGTTG
CCGTCAGGAC TGAAGGAGCT GATTGTATCT GGTAACCGGC TGACCAGTCT GCCGGTGCTG
CCGTCAGAAC TGAAGGAGCT GATGGTATCT GGTAACCGGC TGACCAGCCT GCCGATGCTG
CCGTCAGGAC TACTGTCGCT GTCGGTCTAT CGTAACCAGC TGACCCGCCT GCCGGAAAGT
CTCATTCATC TGTCTTCAGA GACAACCGTA AATCTGGAAG GGAACCCACT GTCTGAACGT
ACTTTGCAGG CGCTGCGGGA GATCACCAGC GCGCCTGGCT ATTCAGGCCC CATAATACAA
TTCGATATGG CGGGAGCCTC CGCCCCCCGG GAAACTCGGG CACTGCACCT GGCGGCCGCT
GACTGGCTGG TGCCTGCCCG GGAGGGGGAA CCGGCTCCTG CAGACAGATG GCATATGTTC
GGACAGGAAG ATAACGCCGA CGCCTTCAGC CTCTTCCTGG ACAGACTGAG TGAGACGGAA
AACTTCATAA AGGACGCGGG GTTTAAGGCA CAGATATCGT CCTGGCTGGC ACAACTGGCT
GAAGATGAGG CGTTGAGAGC AAACACCTTT GCTATGGCAA CAGAGGCAAC CTCAAGCTGC
GAGGACCGGG TCACATTTTT TTTGCACCAG ATGAAGAACG TACAGCTGGT ACATAATGCA
GAAAAAGGGC AATACGATAA CGATCTCGCG GCGCTGGTTG CCACGGGGCG TGAGATGTTC
CGTCTGGGAA AACTGGAACA GATTGCCCGG GAAAAGGTCA GAACGCTGGC TCTCGTTGAT
GAAATTGAGG TCTGGCTGGC GTATCAGAAT AAGCTGAAGA AATCACTCGG GCTGACCAGC
GTGACGGCAG AAATGCGTTT CTTTGACGTA TCCGGCGTGA CGGTTACAGA CCTTCAGGAC
GCGGAGCTTC AGGTGAAAGC CGCTGAAAAA AGCGAGTTCA GGGAGTGGAT ACTGCAGTGG
GGGCCGTTAC ACAGAGTGCT GGAGCGCAAA GCGCCGGAAC GCGTTAACGC GCTTCGTGAA
AAGCAAATAT CGGATTATGA GGAAACGTAC CGGATGCTGT CTGACACAGA GCTGAGACCG
TCTGGGCTGG TCGGTAATAC CGATGCAGAG CGCACTATCG GAGCAAGAGC GATGGAGAGC
GCGAAAAAGA CATTTTTGGA TGGCCTGCGA CCTCTTGTAG AGGAGATGCT GGGGAGCTAT
CTGAACGTTC AGTGGCGTCG TAACTGA
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| Protein sequence | MPFHIGSGCL PATISNRRIY RIAWSDTPPE MSSWEKMKEF FCSTHQTEAL ECIWTICHPP
AGTTREDVVS RFELLRTLAY AGWEESIHSG QHGENYFCIL DEDSQEILSV TLDDAGNYTV
NCQGYSETHR LTLDTAQGEE GTGHAEGASG TFRTSFLPAT TAPQTPAEYD AVWSAWRRAA
PAEESRGRAA VVQKMRACLN NGNAVLNVGE SGLTTLPDCL PAHITTLVIP DNNLTSLPAL
PPELRTLEVS GNQLTSLPVL PPGLLELSIF SNPLTHLPAL PSGLCKLWIF GNQLTSLPVL
PPGLQELSVS DNQLASLPAL PSELCKLWAY NNQLTSLPTL PSGLQELSVS DNQLASLPTL
PSELYKLWAY NNRLTSLPAL PSGLKELIVS GNRLTSLPVL PSELKELMVS GNRLTSLPML
PSGLLSLSVY RNQLTRLPES LIHLSSETTV NLEGNPLSER TLQALREITS APGYSGPIIQ
FDMAGASAPR ETRALHLAAA DWLVPAREGE PAPADRWHMF GQEDNADAFS LFLDRLSETE
NFIKDAGFKA QISSWLAQLA EDEALRANTF AMATEATSSC EDRVTFFLHQ MKNVQLVHNA
EKGQYDNDLA ALVATGREMF RLGKLEQIAR EKVRTLALVD EIEVWLAYQN KLKKSLGLTS
VTAEMRFFDV SGVTVTDLQD AELQVKAAEK SEFREWILQW GPLHRVLERK APERVNALRE
KQISDYEETY RMLSDTELRP SGLVGNTDAE RTIGARAMES AKKTFLDGLR PLVEEMLGSY
LNVQWRRN
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