Gene SeD_A2498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2498 
Symbol 
ID6871045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2377638 
End bp2378171 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content40% 
IMG OID642785578 
Productputative fimbrial subunit protein 
Protein accessionYP_002216236 
Protein GI198242448 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.399602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTT CACTTATTGC TGCTTCTGTA TTGTCTGCTG TATTTATGAG CGCTGGGGTT 
TTTGCTGCTG ATGAAGATAT GGGGGAATTA AAAATAAACG GAGAAGTGGT GGGAACATCC
TGTACTTTCG AAGGTGCAAA TAGCGCGACT ATTGAATTAT CCCAGGTAGG TGTTGATAGA
TTGACTGACT TAAACCCTGG CGATATATAT ACAGGATACA CTAGCCCAGA AGCGATTTTA
AAAGTAAGAT GTACGAATAC AGCTAATCCA CGAATTAGTT TTAACCGTTC TCAATTTGTG
GATAACATGC AAATCACCAA AAATAATGCT ACTAATAATG GTGCGGGCTT CGCTGTTTAT
CTTGATGGTA TTCAGGTGAA ACCGGATGAG GCGGGGAATT ACACTCTGAA TTCAAGTAAG
TTTGAAAATG GTGTATATAC CCTGAACTTT TCTGCCCGCT ATGCCGCCGT TGAAAATACT
GTAACACCAG GTTCTGTTGA ATCTGTACTG ACGATGACGG TATTAACTGA TTAA
 
Protein sequence
MKRSLIAASV LSAVFMSAGV FAADEDMGEL KINGEVVGTS CTFEGANSAT IELSQVGVDR 
LTDLNPGDIY TGYTSPEAIL KVRCTNTANP RISFNRSQFV DNMQITKNNA TNNGAGFAVY
LDGIQVKPDE AGNYTLNSSK FENGVYTLNF SARYAAVENT VTPGSVESVL TMTVLTD