Gene SeD_A2312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2312 
Symbol 
ID6873383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2195598 
End bp2196155 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content42% 
IMG OID642785408 
Productputative type IV pilin protein 
Protein accessionYP_002216068 
Protein GI198244666 
COG category 
COG ID 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.645033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0000000000000870948 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTTTAT TAAATAGTAA AAGAAAAAGC AAAAAAGGTT TCTCATTACT CGAATTATTA 
CTTGTTCTGG GGATTATTGC CGCATTAGTA GTAGCGGCTT TTATTGTGTA TCCCAAGGTT 
CAGGCTTCAC AAAGAGCGCA AGCGGAAAGT AATAATATTG CCACCATACA GGCAGGTGTC 
AAAGCACTCT ATACATCAGC ATCCAGCTTT ACTGGGCTAA CGAATACCGT AGCTGTTCAG 
GCAAAATTCT TCCCTGATAA TATGTTAAGT GGAACAGGCA ATGCAGCTAA ACCAATTAAC 
GCATTCAAAG GGAACGTGAC GCTGGCTGCG GCAGCTACAG GTCCGTCATC TGCGGCAGGT 
TCTTCTTTCA CTATCACATA TGACAACGTG CCAGCAGCAG AATGTGTGAA AATAACCACA 
GCGGCGGCAG GCAATTTTTA CACTGCTAAA GTGGGTTCTA AAGTAGTAAA AGCTGCAGAT 
GGTACCCTTG ATGTAGCAGC TACCGCCGCA GCATGTAATA ACGCTACAAG TAATACATTA 
GTATTCACGT CTATTTAA
 
Protein sequence
MVLLNSKRKS KKGFSLLELL LVLGIIAALV VAAFIVYPKV QASQRAQAES NNIATIQAGV 
KALYTSASSF TGLTNTVAVQ AKFFPDNMLS GTGNAAKPIN AFKGNVTLAA AATGPSSAAG 
SSFTITYDNV PAAECVKITT AAAGNFYTAK VGSKVVKAAD GTLDVAATAA ACNNATSNTL 
VFTSI