| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2282 |
|---|
| Symbol | |
|---|
| ID | 6875506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 2174320 |
|---|
| End bp | 2175201 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642785380 |
|---|
| Product | retron adenine methylase |
|---|
| Protein accession | YP_002216042 |
|---|
| Protein GI | 198243724 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0338] Site-specific DNA methylase |
|---|
| TIGRFAM ID | [TIGR00571] DNA adenine methylase (dam) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.619879 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 2.98029e-22 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGTG AATCCGTTTG TATTGAAAGC AGTGATGTAA CGATATCTGT TGATGAATCC
GCTTCGCGCT CCTGGCGCCG CCCGTTCCTG AAATGGGCTG GCGGTAAATA CTCCATGTTA
CCCGATCTGT ACCAGATCAT TCCGGCAGGG ATGCGCCTGA TTGAACCGTT TGTCGGTGGT
GGCTCGGTGT TTCTCAACTC AGACAAACAT GCCTGCTTCC TGCTGGCCGA TGTGAATACC
GACCTTATCA ACCTGTACCA GATGTTGGCT GTTGTACCGG ATACGGTGAT AAGGCACGCC
AGGGTAATGT TTGACCGCCT CAATGACGCC GAAAGCTATA TGGCGCTACG GGAAGAGTTC
AATGCTCAGG TGATGGACGG ACCGGAACGC GCCGCCGCTT TCCTTTTCCT TAACCGTCAC
TGCTTCAATG GCCTGATCCG GTACAACCGC AACAACCAGT TCAACGTCGG TTGGGGCAAA
TACCCGTCGC CTTATTTCCC GGAAGAAGAA ATCAGGGCAT TTACCAGAAT GGCGCACAAC
TGCGTATTCA TGGCGGCGGG ATTTCGCCGG ACGCTGGCGC TGGCGGGGGA GGGTGATGTT
GTGTACTGCG ATCCACCCTA CGAACCGATG CCCGGCACGG CTGGTTTTAC TCATTACGCC
GCTGGTGGAT TTACCTGGGA TGATCATATC GCGCTGGCGG AATGTTGCGT TACCGCTCAT
CAGCGCGGCG CCAGGGTTGT GATCGGCAAT TCCACCGCGC CGCGCGTTAT CGACCTGTAC
TCACAGCACG GCTTCGAAAT CCGCTATATC AGCGCCCGCC GCTCAATATC GAGTAAGGGC
AGTACCCGCG AGACAGCGAA AGATCTCGTG GCGATTCTGT AG
|
|---|
| Protein sequence | MTSESVCIES SDVTISVDES ASRSWRRPFL KWAGGKYSML PDLYQIIPAG MRLIEPFVGG
GSVFLNSDKH ACFLLADVNT DLINLYQMLA VVPDTVIRHA RVMFDRLNDA ESYMALREEF
NAQVMDGPER AAAFLFLNRH CFNGLIRYNR NNQFNVGWGK YPSPYFPEEE IRAFTRMAHN
CVFMAAGFRR TLALAGEGDV VYCDPPYEPM PGTAGFTHYA AGGFTWDDHI ALAECCVTAH
QRGARVVIGN STAPRVIDLY SQHGFEIRYI SARRSISSKG STRETAKDLV AIL
|
|---|
| |