Gene SeD_A2276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2276 
Symbol 
ID6874916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2169792 
End bp2170268 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content49% 
IMG OID642785374 
Productlysozyme 
Protein accessionYP_002216036 
Protein GI198244978 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4678] Muramidase (phage lambda lysozyme) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00766878 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value1.42848e-18 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGGCAC TAAATTCCCA GCGTAAAGCT TTCCTTGATA TGGTGGCATG GTCAGAAGGA 
ACGGATAACG GGCGACAACC GACACGTAAC CACGGTTATG ATGTTATTGT TGGTGGCGAA 
CTGTTCACTG ATTACTCCGA TCACCCTCGC AAACTTGTCA CGCTAAAGCC CAAACTCAAA 
TCAACAGCCG CCGGACGTTA CCAGCTTCTT TCACGCTGGT GGGATGCTTA CCGTAAACAG 
CTTGGCCTGA AAGATTTTTC TCCAGAAAGC CAGGACGCTG TAGCTCTGCA GCAGATTAAA 
GAGCGTGGCG CTTTACCGAT GATTGACTGC GGCAATATTC GTCAGGCAAT CGACCGTTGC 
AGCAATATCT GGGCGTCGTT ACCTGGTGCA GGTTACGGTC AGTATGAACA TAAAATCGGC 
GACCTGATTG CCCGATTTAA AGAGGCTGGT GGGGAAGTAA ATGAAGCTGA GATATAA
 
Protein sequence
MQALNSQRKA FLDMVAWSEG TDNGRQPTRN HGYDVIVGGE LFTDYSDHPR KLVTLKPKLK 
STAAGRYQLL SRWWDAYRKQ LGLKDFSPES QDAVALQQIK ERGALPMIDC GNIRQAIDRC 
SNIWASLPGA GYGQYEHKIG DLIARFKEAG GEVNEAEI