| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2256 |
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| Symbol | |
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| ID | 6873006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 2155979 |
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| End bp | 2157907 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642785356 |
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| Product | tail protein |
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| Protein accession | YP_002216018 |
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| Protein GI | 198244985 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5283] Phage-related tail protein |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.000173389 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGACA GTTTCCAGTT AAAGGCCATT ATCACTGCCG TTGACCAGTT ATCGGGTCCG
CTGAAAGGGA TGCAGCGGGA ACTGAAGGGA TTTCAGAAAG AAATGGCCGG GCTGGCGATC
GGTGCTGCTG CTGCCGGGAC CGCTGTTCTT GGGGCGCTGG CGCTGCCCGT GAATGCTGCG
ATCGGCTTTG AGTCAAAAAT GGCTGACATC CGGAAGGTGG TTGACGGCCT GGATGATAAA
AAAGCATTCG CGCAGATGAG TGACGATATC CTGACGCTGT CCACACAGTT ACCGATGGCG
GCGGAGGGAA TTGCAGAGAT CGTGGCGGCG GGCGGGCAGG CAGGCATTGC CCGCGGCGAT
TTGATGCAGT TTGCGAACGA CGCAGTGAAA ATGGGTGTGG CGTTTGATAC CACTGCCGAA
GAGTCCGGTC AGATGATGGC GCAGTGGCGG ACAGCGTTCA GACTGACGCA GGAAGACGTG
GTTGTCCTGG CCGATAAAAT CAACTATCTG GGGAATACCG GCCCGGCAAA TGCGAAGAAA
ATTTCTGATA TCGTGACGCG GATTGGTCCG CTTGGCGGTG TTGCCGGAGT GGCATCCGGC
GAAATTGCCG CGATGGGCGC CACCATTGCC GGGATGGGGG TTGAATCGGA GATAGCCTCC
ACCGGCATCA AAAACTTCAT GCTGTCGTTA ACCGCAGGTA ATTCGGCAAC CAAAGCCCAG
AAACAGGCTA TGGCTTTCCT GAAGCTGAAT CCCCGGAAAC TCGCTGAGGA TATGCAAAAG
GATTCGCGCG GGGCCATGCT GAAGGTGCTG GACTCGCTCG CGAAAGTGCC AAAAGCTAAA
CAGGCCGCCG TCATGAATGC GCTGTTTGGC AAGGAGTCAC TTAGCGCGAT TGCCCCGCTG
CTGACCAACC TGGATTTGTT ACGCACCAAT TTTGATCGTG TGGCTGATGC CCAGGAATAT
GGCGGCTCGA TGCAGAAGGA ATACGCATCC CGCGCGGCCA CAACAGAAAA CCAGCTGGTT
CTGCTGAAAA ACAGCGTCAA TGCGATTTCG GTAACGCTGG GCGATACCTT CCTGCCCGCC
ATTAACGAAG CTGCAGAAGC GGTCATGCCT TACCTGGAGC AGCTCCGGAC ATTCGTTCGC
GCGAATCCTG AACTGGTTCA GTCTGCGGCG AAGTTCGGCG CGGCGCTGCT GGCTGTTGGC
GTATCCATTG GCAGCCTGTC CCGGGCTGTC AAAATCCTGA ACAGTGTCAT TAATCTCTCT
CCGGCGAAAG TCGCCATTGC GGCGCTGGTG GCCGGCGCTA TGCTGATCAT TGAGAACTGG
GACGATGTTG CTCCGGTGAT TAAGGCGGTA TGGCAGGAGG TCGATAACGT TGCGCAGGAG
ATGGGCGGAT GGGAGACGGT GATTGAAGGG GTTGGTCTGG TTATGGCTGG TTCTTTTACC
GTCAGGACCA TTGGTGCCCT GCAGCAGTCC GTCCTGCTGG CCGGACGGCT TTCCGGTCTG
CTGGGTAAAA TTGGCCGGAT GGGGGCCATG ACGCTGACAA TTGGCGTGGC GGTGTCACTC
TTTAAAGAGC TTAAGGATCT GGAGCAGGGG GCAAAGGATG CGGGTATGGA TGCTGGCGCA
TTCGCTGTAC AGAAGCTGCA AACGAAGGAG CGTGAACGCG GGTATAACGG TTTTATTCCC
AGACTCAAAG AGCTTCTTGG TATGGACACC CCGATTCCGC AGGGGCGTTA TCAACCTTAT
GTGCCACTGA CCCGGCGTTC TGGCGTACTC GAGCGAGCTG TCCCGCCATC AACGCAGCGC
AGCGAACTCA AAGTGACATT TGAGAATGCA CCACAAGGTA TGCGTGTGAC TGATATACCG
AAATCCGGTA ATCAATTGAT GAACATCAGC CATGATGTGG GTTACTCACC CTTTCGTACA
TCACGATAA
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| Protein sequence | MADSFQLKAI ITAVDQLSGP LKGMQRELKG FQKEMAGLAI GAAAAGTAVL GALALPVNAA
IGFESKMADI RKVVDGLDDK KAFAQMSDDI LTLSTQLPMA AEGIAEIVAA GGQAGIARGD
LMQFANDAVK MGVAFDTTAE ESGQMMAQWR TAFRLTQEDV VVLADKINYL GNTGPANAKK
ISDIVTRIGP LGGVAGVASG EIAAMGATIA GMGVESEIAS TGIKNFMLSL TAGNSATKAQ
KQAMAFLKLN PRKLAEDMQK DSRGAMLKVL DSLAKVPKAK QAAVMNALFG KESLSAIAPL
LTNLDLLRTN FDRVADAQEY GGSMQKEYAS RAATTENQLV LLKNSVNAIS VTLGDTFLPA
INEAAEAVMP YLEQLRTFVR ANPELVQSAA KFGAALLAVG VSIGSLSRAV KILNSVINLS
PAKVAIAALV AGAMLIIENW DDVAPVIKAV WQEVDNVAQE MGGWETVIEG VGLVMAGSFT
VRTIGALQQS VLLAGRLSGL LGKIGRMGAM TLTIGVAVSL FKELKDLEQG AKDAGMDAGA
FAVQKLQTKE RERGYNGFIP RLKELLGMDT PIPQGRYQPY VPLTRRSGVL ERAVPPSTQR
SELKVTFENA PQGMRVTDIP KSGNQLMNIS HDVGYSPFRT SR
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