Gene SeD_A2201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2201 
Symbol 
ID6874060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2109987 
End bp2110379 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content55% 
IMG OID642785303 
Productflagella synthesis protein FlgN 
Protein accessionYP_002215966 
Protein GI198245314 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3418] Flagellar biosynthesis/type III secretory pathway chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.00152401 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCACCG TCCTGAATGA CCTGAAGACG GTGATGGACG CCGAGCAACA ACAGCTTTCC 
GTAGGCCAGA TTAACGGCAG CCAGCTACAG CGTATTACAG AAGAAAAAAG CTCGTTGCTG
GCGACGCTGG ATTATCTGGA ACAACAGCGC CGTCTGGAGC AGAACGCGCA GCGTAGCGCA
AACGATGACA TTGCAGAGCG CTGGCAGGCG ATTACCGAAA AAACGCAGCA TCTTCGCGAC
CTCAACCAGC ACAACGGCTG GCTGCTGGAA GGGCAAATCG AGCGTAATCA ACAGGCGCTG
GAGGTGCTGA AACCTCACCA GGAGCCGACC TTGTACGGGG CTGACGGTCA GACTTCCGTC
TCTCACCGCG GCGGTAAAAA AATTTCTATC TAA
 
Protein sequence
MTTVLNDLKT VMDAEQQQLS VGQINGSQLQ RITEEKSSLL ATLDYLEQQR RLEQNAQRSA 
NDDIAERWQA ITEKTQHLRD LNQHNGWLLE GQIERNQQAL EVLKPHQEPT LYGADGQTSV
SHRGGKKISI