Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2161 |
Symbol | thiK |
ID | 6873290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2074404 |
End bp | 2075228 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642785267 |
Product | thiamine kinase |
Protein accession | YP_002215930 |
Protein GI | 198243426 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis |
TIGRFAM ID | [TIGR02721] thiamine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.000000171857 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCGGTCCA ACAACAATAA TCCCTTAACG CGCGACGAGA TCCTGTCGCG CTATTTTCCC CAGTATCGTC CCGCCGTCGC CGCATCGCAG GGGCTAAGCG GCGGGAGCTG TATTATTGCC CACGATACTC ACCGTATCGT GCTGCGCCGT CATCACGACC CCGACGCTCC ACCAGCCCAT TTTTTACGTC ATTACCGCGC CTTATCCCAA TTGCCGGCCA GTCTTGCGCC GCGAGCGCTT TTTTATACGC CGGGCTGGAT GGCGGTAGAA TATCTGCATG GTGTGGTAAA TTCCGCTCTG CCAGATGCCG ACGAACTGGC GGCCTTACTG TATCATTTGC ATCAACAGCC GCGTTTTGGC TGGCGTATCG CGCTATCGCC ACTATTGGCG CAGTACTGGT CGTGTTGCGA TCCGGCGAGG CGTACGCCGT TTTGGTTGCG GCGGCTCAAA CAGTTGCAAA AAAACGGTGA ACCTCGCCCG CTGCGGCTCG CGCCTTTGCA TATGGATGTC CATGGCGACA ATATAGTATT AACGTCCGCC GGGTTGAGAC TGATTGACTG GGAGTATGCC GGCGACGGCG ATATTGCGTT GGAGCTGGCG GCAGTATGGG TTGAGGATGA ACGCCAGCAC CGACAACTGG CAGACGCGTA TGCAGCGCGC GCGCGAATCG ACGCCCGGCA GCTATGGCGA CAGATACGAT TATGGCACCC CTGGGTCATT ATGCTAAAAG CAGGGTGGTT CGAATACCGC TGGCGACAAA CCGGCGAGCA ACAATTTATC AGGCTGGCCG ATGAAACCTG GCGCCAGCTA CGTATGAAAG GATAA
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Protein sequence | MRSNNNNPLT RDEILSRYFP QYRPAVAASQ GLSGGSCIIA HDTHRIVLRR HHDPDAPPAH FLRHYRALSQ LPASLAPRAL FYTPGWMAVE YLHGVVNSAL PDADELAALL YHLHQQPRFG WRIALSPLLA QYWSCCDPAR RTPFWLRRLK QLQKNGEPRP LRLAPLHMDV HGDNIVLTSA GLRLIDWEYA GDGDIALELA AVWVEDERQH RQLADAYAAR ARIDARQLWR QIRLWHPWVI MLKAGWFEYR WRQTGEQQFI RLADETWRQL RMKG
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