| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2037 |
|---|
| Symbol | spy |
|---|
| ID | 6875298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 1968585 |
|---|
| End bp | 1969070 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642785151 |
|---|
| Product | periplasmic protein |
|---|
| Protein accession | YP_002215817 |
|---|
| Protein GI | 198244232 |
|---|
| COG category | [N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.195484 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAAAC TGACTGCTCT ATTTGTTGCC TCTACCCTGG CGATGGGTGC TGCGAATCTC
GCTCATGCCG CTGAGACTAC CACCGCCGCG CCAGCGGATG CGAAGCCAAT GATGCAGCAT
AAAGGTAAAT TTGGCCCACA TCACGATATG ATGTTTAAAA ACCTGAACCT GACGGACGCA
CAGAAGCAAC AAATTCGCGA CATTATGAAA GCGCAGCGCG AGCAAATGAA ACGTCCGCCG
CTGGAAGAGC GTCGCGCCAT GCATGATATT ATCGCCAGCG ATACCTTCGA TAAAGCCAAA
GCCGAAGCGC AAATTACGAA AATGGAAGCG CAGCGCAAGG CCAATATGCT GGCGCATATG
GAAACCCAGA ATAAAATTTA TAACGTTCTG ACGCCGGAGC AGAAAAAGCA ATATAACGCT
AATTTTGAGA AGCGTCTGAC AGAACGCCCG GCGCAAGAAG GTAAAATGCC TGCTGCGGCA
GAATAA
|
|---|
| Protein sequence | MRKLTALFVA STLAMGAANL AHAAETTTAA PADAKPMMQH KGKFGPHHDM MFKNLNLTDA
QKQQIRDIMK AQREQMKRPP LEERRAMHDI IASDTFDKAK AEAQITKMEA QRKANMLAHM
ETQNKIYNVL TPEQKKQYNA NFEKRLTERP AQEGKMPAAA E
|
|---|
| |