Gene SeD_A1961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1961 
Symbol 
ID6875215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1893217 
End bp1893954 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content43% 
IMG OID642785081 
Producthypothetical protein 
Protein accessionYP_002215747 
Protein GI198242291 
COG category[S] Function unknown 
COG ID[COG5426] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.00000000998327 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATTT TATTTATTGG CGAATCCTGG CACATTCATA TGATTCACTC TAAAGGTTTT 
GATAGCTTTA CATCGAGCAA ATATGAAGAA GGCGCAGACT ATTTATTATC CTGCTTACGC 
CAGGGTAATA TCGATGTGGA CTACATGCCT GCCCATATTG TGCAAACTCG TTTTCCACAT 
ACCGCCGAAG CATTAGCCTG CTATGATGCG ATCGTCATCA GTGATATCGG TAGCAATACG 
TTCCTGCTAC AAAACAGAAC GTTTTATAAT ATGGACATTA TTCCTGATGC ATTACAACTT 
ATCGCCGATT ATGTTGCTGA GGGCGGCGGT CTGTTGATGA TCGGCGGGTA TTTATCCTTT 
ACGGGAATAG AAGCAAAAGC CAATTATAAA AATACGGTTC TGGCGGAGGT ATTGCCGGTT 
GATATGCTGG ATGTAGATGA CCGCGTAGAA CTACCGCAAG GATGTAAAGC AGTAAATACT 
GCGGTAGAGC ATGTTATTAC CCAGCCATTT AGCGAATGGC CGCCGCTGTT GGGCTATAAC 
AAGCTTATCG CCAAAGAAAA TAGTCAAGTC CTTGCTGAAA TTAATGGCGA TCCACTGTTA 
GTTATGGGTA CTTACCATAA AGGGAAAGTA TGTTGCTTTG CCAGTGATTG TTCGCCGCAC 
TGGGGAAGCC CGCAGTTTCT GCAATGGGAA CATTACGCCA CCTTCTGGTG TAATGTTTTA 
CACACAATAA AAAAATAA
 
Protein sequence
MKILFIGESW HIHMIHSKGF DSFTSSKYEE GADYLLSCLR QGNIDVDYMP AHIVQTRFPH 
TAEALACYDA IVISDIGSNT FLLQNRTFYN MDIIPDALQL IADYVAEGGG LLMIGGYLSF 
TGIEAKANYK NTVLAEVLPV DMLDVDDRVE LPQGCKAVNT AVEHVITQPF SEWPPLLGYN 
KLIAKENSQV LAEINGDPLL VMGTYHKGKV CCFASDCSPH WGSPQFLQWE HYATFWCNVL 
HTIKK