Gene SeD_A1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1896 
Symbol 
ID6873697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1835395 
End bp1835718 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content46% 
IMG OID642785019 
Productlysozyme inhibitor 
Protein accessionYP_002215687 
Protein GI198242545 
COG category[R] General function prediction only 
COG ID[COG3895] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.537377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA TCGCAATAAT GTGTTTACCT GTGCTGCTGA CCGGCTGTAG CGTTTATCAA 
CAATTTGTTG AACATATGCA AACGGATACG CTGGAATACC AGTGTGATGA GAAGCCGCTT 
ACCGTTAAAG TCAATAACCC GCGTGAAGAG GTCAGTTTTG TTTATGACAA TAAGCTGCTG 
ACCCTGAAGC AAGGAATCTC GGCCTCGGGC GCGCGTTATA CCGACGGGAT TTATGTTTTC 
TGGTCGCAAG GCGAGAGCGC CACGGTCTAT AAACGAGACA GAATTGTGCT TAATAACTGT 
CAGTTACAAA ATCCGAAGCG TTGA
 
Protein sequence
MKKIAIMCLP VLLTGCSVYQ QFVEHMQTDT LEYQCDEKPL TVKVNNPREE VSFVYDNKLL 
TLKQGISASG ARYTDGIYVF WSQGESATVY KRDRIVLNNC QLQNPKR