| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1871 |
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| Symbol | |
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| ID | 6872649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 1808603 |
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| End bp | 1810303 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642784997 |
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| Product | putative amidohydrolase family protein |
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| Protein accession | YP_002215665 |
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| Protein GI | 198242385 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0576549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGTC TCGTCCCGCC TCTGCTTTCC AGAACCGCGC TTCTCTTTCT GCTCACGGCC
ACAGGCGCAG CCACCGCCGC CCGCCCGGCA GCGGATATTA TTTTGCATAA CGGTAATATC
ATCACTCTGA ATGATGCCCA GCCGCAGGCC AGCGCGCTGG TGATTTCCGG CTCGCGGATT
GTGGCGATTG GCGATGATAC GGCGACAGAT GAATGGCGCG GCGACCATAC CCGTACCATC
GATTTACAGG GTAAAACCGT GATACCCGGC CTGACCGATA CCCACATCCA CGCCATTCGC
GGCGGACAAA CCTGGACATT CGAAACCTAC TGGTACGACA GCCCTTCGCT TAAAGACGCG
CTGGATAAAT TACGCGCCGA CGCTAACCGT CGTCCCCACG ATCAATGGGT AGCCGTAGTG
GGATCGTGGA TACCGGCGCA ATTTGCAGAA AACCGGGCGC CGACGGTAGC CGAATTGAGC
CACGCCCTTC CCGATCATCC GGCTTATATT CAGTATCTTT ACGACTATGC TTTAGTGAAT
CAGCGCGGTA TAGACGTACT TGGCCTTAAC GACACCCCTC CTCCTGATTT AGCGGGAATC
CGCGTAGAGC GCGACGCAAA AGGTAGCGCC ACGGGGAAAT TATTTGGTGA CATCGCCGCG
TTTAACCAGC TTTTTGCCAG CATAAGTAGT AACGCCGATC GCGAGGGCGG TCTGCGACAA
TTTTTCGCTG ATATGAACGC TCGCGGCGTG ACCGGCATCA TTGACCCCTC TGCCGGGCCT
GCCGCCGCTT ATGAGCCTTT ATTTGCAATG CGAAACCAGG GGGATTTACC GCTGCGCGTG
GGGTATCGCA TTCCGGTACA GCCAGAAGCG AAAGGTCATG AAGCGCAGTG GTTCAGCAAC
CTGATGGCCT TTCGCCCGGC GCGTGCCGAT GACGGGCAAC TGGCTTTTCT TGGCCTGGGG
GAAAGCCTGG TGGCCGGAAT GAATGACGGC GTGCGGATGG CCCCAGGGTT TTCTTCCTCA
GAGCAGGACA AAACCGCGCT TCGCCAGGTC GCGACATTTG CGGCAAAACG GGGAATACCG
CTTGAGATCC ACGCCTATAC CGATGACAGC GCCGACGCGA TATTGACGAT TTTTGAGCAG
GTAGCGCAGC AGTACGATCT GCGCCCTCTC CGCTGGTCTA TTGCGCATCT GAATACCGGT
TCGCCACAGA CGCTTGAGCG AATGCGTAAG CTGGGTCTGG CATACACTGT GCAAATGGGG
CCTTACTTTG AGGGGCTTGC CATCCGTGAC GCCAATCCCC CCGGCGCGAC GGACAATTCG
CCGCCGGTTC GACTGGCGCT GGATAAAGGG CTTGTCGTAG CTGGCGGTAC CGATTCGACG
CGTATTGGCA TTGCCGGTGT CTGGCACGCT ATCGAATATC ATATCATCGG TATAGCGTCA
GGCGGTTCCG TGCGTAAACC CGCCAGCGAG CGGCTCACGC GTCTGGAAGC GCTAGCGTTA
TATACACGTC ATGCCGCCTG GCTCGCCTTT GCCGAACAAC ACCGGGGCCA GCTTCGCGTC
GGAAAACAGG CCGATCTGGC GGTACTCAAT CAGCCATTTA TGACGATGCC GGAAGACAGA
ATTGATACCA TTCGCGCTGT TTTGACGCTT GTCGATGGAC GCATTGTTCA CGAAAGTCCG
GACCTTAACG CCGGACAATG A
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| Protein sequence | MISLVPPLLS RTALLFLLTA TGAATAARPA ADIILHNGNI ITLNDAQPQA SALVISGSRI
VAIGDDTATD EWRGDHTRTI DLQGKTVIPG LTDTHIHAIR GGQTWTFETY WYDSPSLKDA
LDKLRADANR RPHDQWVAVV GSWIPAQFAE NRAPTVAELS HALPDHPAYI QYLYDYALVN
QRGIDVLGLN DTPPPDLAGI RVERDAKGSA TGKLFGDIAA FNQLFASISS NADREGGLRQ
FFADMNARGV TGIIDPSAGP AAAYEPLFAM RNQGDLPLRV GYRIPVQPEA KGHEAQWFSN
LMAFRPARAD DGQLAFLGLG ESLVAGMNDG VRMAPGFSSS EQDKTALRQV ATFAAKRGIP
LEIHAYTDDS ADAILTIFEQ VAQQYDLRPL RWSIAHLNTG SPQTLERMRK LGLAYTVQMG
PYFEGLAIRD ANPPGATDNS PPVRLALDKG LVVAGGTDST RIGIAGVWHA IEYHIIGIAS
GGSVRKPASE RLTRLEALAL YTRHAAWLAF AEQHRGQLRV GKQADLAVLN QPFMTMPEDR
IDTIRAVLTL VDGRIVHESP DLNAGQ
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