Gene SeD_A1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1858 
Symbol 
ID6873813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1797487 
End bp1797849 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content45% 
IMG OID642784988 
Productmultidrug efflux system protein MdtJ 
Protein accessionYP_002215656 
Protein GI198241742 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.636253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTACT GGATTTTATT AGCTCTGGCT ATCGCGACTG AAATTACCGG CACGCTCTCA 
ATGAAATGGG CTAGCGTGGG TAATGGCAAT GCGGGGTTTA TTTTAATGCT GGTGATGATC
ACGCTGTCAT ATATATTTCT TTCTTTTGCG GTAAAAAAGA TTGCCCTGGG TGTAGCGTAT
GCCTTATGGG AAGGGATCGG CATTTTATTT ATTACCATTT TTAGCGTGCT GCTATTTGAT
GAAGCATTAT CAACCATGAA GATTGCCGGC TTGCTGACGC TGGTCGCCGG CATAGTATTG
ATCAAATCAG GGACGCGTAA ACCCGGCAAA CCGGTGAAGG AGGCGACTCG TGCAACAATT
TGA
 
Protein sequence
MFYWILLALA IATEITGTLS MKWASVGNGN AGFILMLVMI TLSYIFLSFA VKKIALGVAY 
ALWEGIGILF ITIFSVLLFD EALSTMKIAG LLTLVAGIVL IKSGTRKPGK PVKEATRATI