Gene SeD_A1825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1825 
Symbol 
ID6871091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1767330 
End bp1768412 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content53% 
IMG OID642784957 
Productpeptidyl-dipeptidase dcp 
Protein accessionYP_002215625 
Protein GI198243512 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0339] Zn-dependent oligopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.425025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones93 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACGA ATCCTTTGTT AGACCAGAGT ATGTTGCCCT ATCAGGCACC GCGTTTTGAT 
CGGATCAAAG ATTGCCATTA TCGTCCTGCT TTTGATGAGG GCGTTCGGCA AAAACGCGTG 
GAAATCGAGG CCATCGTCAA TCATCCGGCG GCCCCTGACT TTACGAATAC GCTTCTGGCG 
CTGGAGCAAA GCGGGGCGCT TCTGTCACGC GTCACCAGCA TTTTTTTCGC GATGACGGCC 
GCGCACACTA ACGATGAACT CCAGCGGTTG GATGAGGCCT TTTCTGCCGA GCTGGCGGCG 
CTCTCCAACG ATATTTATCT GAATAGCGCG TTATTCGCTC GCGTGGATGC CGTCTGGCAA 
CAGCGTCACT CACTGGGGCT GGATGATGAG TCGCTACGGT TGGTCGATGT GATCCATCAG 
CGTTTTGTGT TGGCAGGCGC GCAGCTTGCC GAAGAGGATA AAGCGCAACT GAAGGTATTG 
AATACTGAAT CCGCGACCTT AATGAGTCAG TTTAATCAGC GTCTGCTGGC GGCAAGTAAA 
GCGGGCGGGC TGGCGGTCGA TGACGCGCAT TGCCTGGCAG GATTAAGCCC GGAAGAAATG 
ACCGTCGCTG CTGAAGCGGC GCGTGAAAAA GGCCTGGAGG AGCGCTGGTT CATTCCGCTC 
CTTAATACGA CGCAACAGCC TGCGCTTGCT ACGCTGCGCG ATCGCCAGAC TCGCGAAAAT 
TTATTCGCAG CGTCATGGAC TCGGGCGGAA AAAGGAGATG CCCACGATAC CCGCGCTATC 
GTTCAGCGTC TGGTAGAGAT TCGTCGCTGT CAGGCAAAAC TGCTGGGTTT CCCCAATTAT 
GCCGCATGGA AAATGGCCGA TCAGATGGCG AAAACGCCGC AAGCCGCACT GAGCTTTATG 
CGTGGCATTG TGCCGCCAGC GCGTCAGCGT GTACTCAATG AACAGGCGGA AATTCAGAAC 
GTCATATTTA TGGGGTTAAA TTGTCTGAAT ATAAAGAGGG CGTGCATTCG GATTTTTCTA 
CTTATTTTCC CGTGGTGGCT TGATTGCCAA AGATTTATTA CCGCTTCGCT GCTGATGTTT 
TAA
 
Protein sequence
MSTNPLLDQS MLPYQAPRFD RIKDCHYRPA FDEGVRQKRV EIEAIVNHPA APDFTNTLLA 
LEQSGALLSR VTSIFFAMTA AHTNDELQRL DEAFSAELAA LSNDIYLNSA LFARVDAVWQ 
QRHSLGLDDE SLRLVDVIHQ RFVLAGAQLA EEDKAQLKVL NTESATLMSQ FNQRLLAASK 
AGGLAVDDAH CLAGLSPEEM TVAAEAAREK GLEERWFIPL LNTTQQPALA TLRDRQTREN 
LFAASWTRAE KGDAHDTRAI VQRLVEIRRC QAKLLGFPNY AAWKMADQMA KTPQAALSFM 
RGIVPPARQR VLNEQAEIQN VIFMGLNCLN IKRACIRIFL LIFPWWLDCQ RFITASLLMF