| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1764 |
|---|
| Symbol | narY |
|---|
| ID | 6871206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 1702562 |
|---|
| End bp | 1704106 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642784901 |
|---|
| Product | nitrate reductase 2 subunit beta |
|---|
| Protein accession | YP_002215569 |
|---|
| Protein GI | 198245547 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1140] Nitrate reductase beta subunit |
|---|
| TIGRFAM ID | [TIGR01660] nitrate reductase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.939627 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 76 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAC GCTCACAGGT TGGGATGGTA CTGAATCTTG ATAAATGTAT TGGCTGTCAC
ACCTGCTCCG TCACCTGTAA AAACGTCTGG ACCGGACGTG AAGGGATGGA ATACGCATGG
TTCAATAACG TCGAAACTAA ACCGGGTATC GGCTATCCCA AAAACTGGGA AGACCAGCAG
GAGTGGCAAG GCGGTTGGGT TCGTGATGTT AATGGCAAGA TAAGGCCCCG TCTGGGCGGC
AAAATGGGGG TAATTAGCAA AATTTTCGCC AACCCGGTGA TTCCGCAAAT CGATGATTAC
TATGAACCCT TTACCTTCGA TTATCAGCAT TTACATAATG CGCCGGAGAG TAAGCATCAG
CCCACTGCCC GTCCTCGTTC ACTGATCGAC GGAAAACGGA TGGACAAGGT GATCTGGGGG
CCAAACTGGG AAGAGCTGCT CGGCGGCGAG TTTGAAAAAC GCGCCCGCGA CCGCAACTTC
GACAACATAC AAAAGGAGAT GTACGGTCAG TTCGAAAACA CCTTCATGAT GTACCTGCCG
CGCCTGTGCG AACACTGCCT CAACCCCAGT TGTGTCGCCA CCTGCCCAAG TGGCGCTATT
TATAAGCGTG AAGAAGACGG CATCGTGCTA ATCGACCAGG ATAAATGCCG GGGCTGGCGT
TTGTGTATCA GCGGCTGCCC GTACAAAAAA ATCTACTTTA ACTGGAAGAG CGGCAAGTCT
GAGAAATGCA TATTTTGCTA TCCGCGTATT GAATCCGGCC AGCCGACCGT TTGCTCGGAA
ACCTGCGTCG GGCGCATCCG TTATCTTGGC GTTCTGCTCT ACGACGCCGA CAGGATTGAA
GAAGCGGCCA GTACCGAACA CGAGACGGAT TTGTATGAAC GTCAGTGTGA TGTGTTTCTC
AATCCGCACG ATCCGGCGGT CATCGAAGAG GCGCTTAAAC AGGGCATCCC GCAAAACGTC
ATCGACGCTG CCCAACGGTC GCCGGTGTAC AAAATGGCGA TGGACTGGAA GCTGGCGCTT
CCGCTGCACC CGGAATACCG TACCCTGCCG ATGGTCTGGT ACGTACCGCC GCTGTCGCCC
ATCCAGTCAT ACGCCGACGC GGGCGGGTTA CCGCACAATG GCAATATTCT GCCGGCGGTG
GAGACGCTGC GTATTCCGGT CCAGTACCTG GCCAATATGC TCAGCGCGGG CGATACCGGT
CCGGTCATTC GGGCTCTAAA GCGGATGATG GCGATGCGCC ACTACATGCG CTCGCAGACG
GTTGAAGGCG TGACGGATAC CCGCGCGATT GACGAAGTCG GTCTGAGCGT ACAACAGGTT
GAAGAGATGT ATCGCTACCT GGCGATTGCC AATTATGAAG ATCGTTTTGT CATTCCCACC
AGCCACCGGG AAATGGCGCG CGATGCCTTT CCGGAGCGCA ACGGCTGCGG CTTTACTTTT
GGCGACGGTT GCCACGGGTC GGATACCAAA TTCAACCTGT TCAACAGTAG CCGTATTGAT
GCTATCAATA TCACCGAAGT ACGTGATAAA GCGGAGGGGG AATAA
|
|---|
| Protein sequence | MKIRSQVGMV LNLDKCIGCH TCSVTCKNVW TGREGMEYAW FNNVETKPGI GYPKNWEDQQ
EWQGGWVRDV NGKIRPRLGG KMGVISKIFA NPVIPQIDDY YEPFTFDYQH LHNAPESKHQ
PTARPRSLID GKRMDKVIWG PNWEELLGGE FEKRARDRNF DNIQKEMYGQ FENTFMMYLP
RLCEHCLNPS CVATCPSGAI YKREEDGIVL IDQDKCRGWR LCISGCPYKK IYFNWKSGKS
EKCIFCYPRI ESGQPTVCSE TCVGRIRYLG VLLYDADRIE EAASTEHETD LYERQCDVFL
NPHDPAVIEE ALKQGIPQNV IDAAQRSPVY KMAMDWKLAL PLHPEYRTLP MVWYVPPLSP
IQSYADAGGL PHNGNILPAV ETLRIPVQYL ANMLSAGDTG PVIRALKRMM AMRHYMRSQT
VEGVTDTRAI DEVGLSVQQV EEMYRYLAIA NYEDRFVIPT SHREMARDAF PERNGCGFTF
GDGCHGSDTK FNLFNSSRID AINITEVRDK AEGE
|
|---|
| |