Gene SeD_A1729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1729 
Symbol 
ID6875104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1665346 
End bp1665627 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content50% 
IMG OID642784866 
ProductPTS system lactose/cellobiose-specific transporter subunit IIB 
Protein accessionYP_002215534 
Protein GI198242321 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3414] Phosphotransferase system, galactitol-specific IIB component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0436127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.448527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAA AGATCCTTGT GGCATGTGGT AGCGGCATGT CGACATCAAC CATGATTGCA 
CAAAAACTGC AGGACTTTCT CGCGGAGCAA GGCATTGCGG CAACCACGGC GCAATGTTGT
CTGAATGAGA TCCCGTTGAA CTGTAACGGT ATGGATCTCA TCGTAACGTC CATGCGTACG
CACAGTGACT ATGGCATCCC GACGCTCAAC GGCGCCGCCC TGCTGACAGG CATCAACGAC
GACGCATTAA AACAAGAAAT CAAGGCGCTG TTAACACAAT AA
 
Protein sequence
MMKKILVACG SGMSTSTMIA QKLQDFLAEQ GIAATTAQCC LNEIPLNCNG MDLIVTSMRT 
HSDYGIPTLN GAALLTGIND DALKQEIKAL LTQ