Gene SeD_A1690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1690 
Symbol 
ID6873120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1626758 
End bp1627024 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content58% 
IMG OID642784831 
Producthypothetical protein 
Protein accessionYP_002215499 
Protein GI198243280 
COG category[R] General function prediction only 
COG ID[COG3042] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.00263408 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCGCAG CGTTTTGGGT GGGATGTGCC GCGTTATTAT TGTCGGCTTG CAGTAGCGAA 
CCTGTTCAGC AGGCAACCGC GGCACATGTT TCGCCAGGGA TGAAAGCGGC GATGTCCAGC 
GCCGGCGAAG CGAATTGCGC TATGATTGGC GGTTCGCTTT CAGCGGCCCG GCAGCTTGAT 
GGTTCAGTAA TTGGTATGTG CGCGCTACCC AACGGCAAAC GTTGTAGCGA ACAGTCGCTT 
GCCGCCGGAA GCTGCGGGAG TTATTAA
 
Protein sequence
MRAAFWVGCA ALLLSACSSE PVQQATAAHV SPGMKAAMSS AGEANCAMIG GSLSAARQLD 
GSVIGMCALP NGKRCSEQSL AAGSCGSY