Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A1601 |
Symbol | trpA |
ID | 6874725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 1543529 |
End bp | 1544335 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642784747 |
Product | tryptophan synthase subunit alpha |
Protein accession | YP_002215415 |
Protein GI | 198245481 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.0807887 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGCT ACGAAAATTT ATTTGCACAG CTCAACGATC GCCGGGAAGG CGCTTTTGTC CCCTTCGTGA CCCTGGGCGA CCCTGGCATT GAACAGTCAC TGAAAATTAT CGACACACTG ATTGACGCTG GCGCCGACGC TCTGGAACTG GGGGTTCCCT TCTCCGATCC GCTGGCCGAT GGCCCTACCA TCCAGAATGC GAACTTACGC GCCTTCGCCG CTGGCGTCAC GCCGGCTCAG TGTTTTGAAA TGCTGGCGCT GATTCGTGAA AAACACCCGA CCATTCCGAT TGGCCTGCTA ATGTACGCGA ATCTGGTGTT CAATAACGGC ATAGATGCGT TCTATGCCCG TTGTGAACAG GTTGGCGTAG ATTCCGTGCT GGTCGCAGAT GTCCCGGTTG AAGAGTCGGC CCCCTTCCGC CAGGCGGCGT TACGGCATAA TATCGCGCCG ATCTTCATCT GCCCGCCAAA TGCGGATGAC GATCTTCTGC GCCAGGTCGC ATCTTACGGC CGCGGTTACA CCTACCTGCT TTCGCGTTCG GGCGTCACCG GCGCGGAAAA CCGTGGCGCA TTGCCGTTGC ATCATCTCAT TGAGAAGCTT AAAGAGTACC ATGCCGCGCC TGCGTTACAG GGCTTCGGTA TCTCCTCGCC GGAACAGGTG TCTGCGGCCG TGCGTGCCGG GGCGGCTGGC GCTATCTCCG GCTCAGCCAT TGTCAAGATT ATCGAGAAAA ACCTCGCGTC TCCCGAACAG ATGTTGGCGG AGCTCAGGTC CTTTGTCTCA GCCATGAAAG CCGCCAGCCG CGCATAA
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Protein sequence | MERYENLFAQ LNDRREGAFV PFVTLGDPGI EQSLKIIDTL IDAGADALEL GVPFSDPLAD GPTIQNANLR AFAAGVTPAQ CFEMLALIRE KHPTIPIGLL MYANLVFNNG IDAFYARCEQ VGVDSVLVAD VPVEESAPFR QAALRHNIAP IFICPPNADD DLLRQVASYG RGYTYLLSRS GVTGAENRGA LPLHHLIEKL KEYHAAPALQ GFGISSPEQV SAAVRAGAAG AISGSAIVKI IEKNLASPEQ MLAELRSFVS AMKAASRA
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