Gene SeD_A1555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1555 
Symbol 
ID6871422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1500428 
End bp1501852 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content53% 
IMG OID642784707 
Producthypothetical protein 
Protein accessionYP_002215377 
Protein GI198246213 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.125708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTCC TCTTATCTTT TGTTGTAGAA GTTGCCGACA CGTTGAGCCG TATTGTTTTT 
CGTTCATTCT CACTCTCGCT TCTCTTGCTG GCTGCCAGCG GTACGATCCG TGCGCAGGCG
CAAGACCCTT TCACGCAAAA CCGTCTGCCG GATTTAGGCA TGATGCCGGA ATCCCACGAA
GGGGAAAAGC ATTTTGCCGA GATGGCCAAA GCGTTTGGCG AAGCCAGCAT GAAAAATAAC
GATCTGGATA CTGGTGAACA GGCGCGGCAA TTCGCTTTCG GACAGGTACG CGATGTGGTC
AGCGAGCAGG TTAACCAGCA GCTTGAAAGC TGGCTATCAG CCTGGGGCAG CGCCAGCGTG
GATATTAACG TCGATAACGA AGGTCATTTT AACGGCAGTC ACGGAAGCTG GTTTATCCCT
TTACAGGATA AACAGCGCTA TCTGACCTGG AGCCAGCTTG GTCTTACGCA ACAGACTGAT
GGACTGGTAA GCAACGTTGG CATAGGACAG CGCTGGGCGC AGGATGGCTG GCTTCTTGGC
TATAATACCT TTTACGATAA TCTGCTGGAT GAAAATCTGC AGCGCGCCGG CTTTGGCGCG
GAGGCGTGGG GAGAATATTT GCGTTTATCC GCCAACTATT ATCAGCCTTT TGCCGACTGG
CAGACGCATA CGGCGACCTT AGAACAGCGA ATGGCGCGCG GGTATGATAT CAACGCGCAA
ATGCGGCTGC CGTTTTACCA GCATATCAAT ACCAGCGTTA GTCTGGAGCA GTACTTTGGC
GATAGCGTGG ATCTGTTTGA CTCCGGAACG GGGTATCACA ATCCTGTCGC GTTAAAACTG
GGTCTCAACT ATACGCCAGT ACCTTTGCTT ACCATGACCG CCCAGCACAA ACAGGGCGAG
AGCGGGGTCA GTCAAAATAA CCTGGGGCTG ACGCTTAACT ACCGCTTCGG CGTGCCGCTC
AAAAAGCAGC TTGCCGCCAG TGAAGTGGCG CAAAGCCAGT CATTACGCGG TAGCCGCTAT
GATACGCCGC AACGTAACTC GCTGCCGACA ATGGAGTATC GGCAGCGTAA AACGTTAACG
GTTTTTCTGG CGACGCCGCC CTGGGATCTT ACGCCTGGTG AGACGGTTGC GTTAAAATTG
CAGGTGCGCA GCGTGCACGG TATTCGTCAT TTGAGCTGGC AGGGCGATAC ACAGGCATTA
AGTTTGACGG CAGGAACGGA CACCCGTAGT ACCGAGGGCT GGACAATCAT TATGCCGGCC
TGGGATCACC GCGAAGGCGC GGCAAATCGC TGGCGTTTAT CGGTGGTGGT TGAGGATGAA
AAAGATCAGC GTGTCTCTTC CAATGAGATC ACGCTCGCGC TGACTGAACC GTTTATCACG
ATGCCGGACG ATAATCCGCA TTGGCAACCG TTCCAGGAGC AATAA
 
Protein sequence
MPFLLSFVVE VADTLSRIVF RSFSLSLLLL AASGTIRAQA QDPFTQNRLP DLGMMPESHE 
GEKHFAEMAK AFGEASMKNN DLDTGEQARQ FAFGQVRDVV SEQVNQQLES WLSAWGSASV
DINVDNEGHF NGSHGSWFIP LQDKQRYLTW SQLGLTQQTD GLVSNVGIGQ RWAQDGWLLG
YNTFYDNLLD ENLQRAGFGA EAWGEYLRLS ANYYQPFADW QTHTATLEQR MARGYDINAQ
MRLPFYQHIN TSVSLEQYFG DSVDLFDSGT GYHNPVALKL GLNYTPVPLL TMTAQHKQGE
SGVSQNNLGL TLNYRFGVPL KKQLAASEVA QSQSLRGSRY DTPQRNSLPT MEYRQRKTLT
VFLATPPWDL TPGETVALKL QVRSVHGIRH LSWQGDTQAL SLTAGTDTRS TEGWTIIMPA
WDHREGAANR WRLSVVVEDE KDQRVSSNEI TLALTEPFIT MPDDNPHWQP FQEQ