Gene SeD_A1434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1434 
Symbol 
ID6874965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1401400 
End bp1401687 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content54% 
IMG OID642784596 
Productlytic enzyme 
Protein accessionYP_002215266 
Protein GI198244105 
COG category[R] General function prediction only 
COG ID[COG3179] Predicted chitinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.197668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.284456 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCA AGAAAGCTTT CGCACCACGT TCGGCGAAGA TCAGGATTAC CGGGCTGGAG 
AATTACACCA GATGTGGCGT TGCACTGAAA CTGGATCTAG TGGCGAATCC AGGACAGCTT 
GAGCTAGAAC GTCATGCCGC CCGATCCGCA GCGTGGCTTT TTGTGACTAA AGGGTGTCTG 
AAATATTCCG GCGACCTGGT ACGAGTTACG CAGATCATCA ACGGAGGGCG GAACGGCATC 
GGTGATCGGC GGGAGCGCTT TGAGAAAGCA AAATCGGTGC TGGTATGA
 
Protein sequence
MNGKKAFAPR SAKIRITGLE NYTRCGVALK LDLVANPGQL ELERHAARSA AWLFVTKGCL 
KYSGDLVRVT QIINGGRNGI GDRRERFEKA KSVLV