Gene SeD_A1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1402 
Symbol 
ID6873684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1371792 
End bp1372241 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content53% 
IMG OID642784568 
Productphage lysozyme 
Protein accessionYP_002215238 
Protein GI198245056 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0000000103436 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAATCA GTGAAAAAGG CATTACCCTA ATCAAAGAGT TTGAAGGTTG TAGCCTGACA 
GCTTATCCGG ACCCGGGAAC GGGGGGAGAT CCCTGGACGA TTGGTTATGG CTGGACCCAC 
TCTGTTGACG GTAAGCCAGT TAAGCCCGGA ATGATGATTG ACGAGGCTAC TGCCGAGCGC 
TTGCTTAACA CTGGTTTAGT CGGTTATGAA AATGATGTGT CCAGACTGGT TAAGGTCAAG 
TTGACGCAAG GCCAGTTTGA TGCGCTGGTG TCGTTCGCGT ACAACCTCGG CGCCCGGACA 
TTATCCTCAT CAACTCTGCT GCGGAAGCTA AACGCTGGTG ATTACGCTGG CGCCGCTGAT 
GAGTTCCTGC GCTGGAATAA GGCTGGTGGC AAAGTACTGA ACGGGCTTAC CCGTCGGCGT 
GAGGCGGAGC GTGCTCTGTT CCTGTCATGA
 
Protein sequence
MRISEKGITL IKEFEGCSLT AYPDPGTGGD PWTIGYGWTH SVDGKPVKPG MMIDEATAER 
LLNTGLVGYE NDVSRLVKVK LTQGQFDALV SFAYNLGART LSSSTLLRKL NAGDYAGAAD 
EFLRWNKAGG KVLNGLTRRR EAERALFLS