Gene SeD_A1350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1350 
Symbol 
ID6874839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1325230 
End bp1326726 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content48% 
IMG OID642784518 
Productputative periplasmic phosphate-binding protein 
Protein accessionYP_002215188 
Protein GI198244417 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0226] ABC-type phosphate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.00592696 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGATAA TAAAGTCGAT AAAATTTTGG CTGGCAGAAA TCGTGCTGCT GGTCGTGGTG 
TTGCCGATAT TAGCAATAAT ATTCAGTATC TTTAACATTA TTTTTAATAT TGCTGGCGAT
ATCTATGGGC TTATCGCCAC GCTGATGGCC ACCATTCTTG TGGGTTGTGC GACTGGCGGT
ATTCGCGGTC GCTTTATCGA TGAACGCGAG CGTTTTATTC CTGGTTTTTT ACCTGCCTTA
TTACTGATTT TCTATTCTCT TACCGTTTGG CTGATAATGA TTATCGTCGC TGACGGCGAC
TTCGAAAGTA GCGTGTTTTA TCACGGGATA CAGTGGTTCG GACTCTATTC TGCCTTGATC
AAATCGGCTT TAATGACGGA ATTTTATGAG ATATCATCGT CAAGGGTGAT CATTGCCCCA
GTGATTCCAT TTGTCGGCTT CCTGTCGTAT ACCATCATGC GTTTTATCAC CGTCCGGCAG
AATAATAAGT TGGAAAACGT CACCGGATGG CGAAGTATTG TTCTGCTCAT TGCCGCAATG
ACAATTGCCA TTAGCGGATT ATTGTCCTGG CAAACTTATG ATCGTCGCGA GCGACGAGTG
GTTAACGATC CGGCTAGGGA AATAACGGAA TCTTTTGAGC CTGGCACATA TGACCCGTTT
ACCCCCGATA ATAAACTGAC GGCGCTGAGC GCATCACCTG GGCTATCGCT GGAAAACGAC
TGGCCGCGAC TGAATGGCGC AACGGCAGTT TATCCGGTGT ACGCCTCGGC AGCGCAGGCG
CTGTATCACA ATCTGGATGT AGACAGCGTG TGGAAATATG TTCGCTGCGA TCGGACACCT
GGTGCCTGGG AGAAGTTAAT TCATGGTGAA GCGGATATCA TTTTTGTCGC TGAGCCTTCC
GCCGAGCAAA AAGCCAGCGC GAGGGCGCAG GGCGTTGATT TACACTTCTA TCCCATTGCC
CGCGAGGCTT TTGTTTTTGT CACGCATAAG GATAATCCGC TGACTCAACT GAGTGAAAAA
CAGATTCGCG ATATCTATTC CGGGCGTGTG AACAACTGGC TGGAAGTCGG CGGCAACGAT
GCGCGTATTT ACCCCTATCA GCGGCCAAAG GGATCGGGTA GCCAGACGAT TATGCTGGCT
GCGGTGATGG GCGAGGATAA ACTTCGCAAG CCGCTGGAAA CAGAATCCGT TCACGATATG
ATCGGATTGC TGCGTAATGT GGCAAATTAC CAGAACAGCG CCAATGCTCT GGGGTATACC
TTCCGCTATT ATGCTACGCA GCTTCACCAT AGCCCTGATT TGCGCTTGCT GGCGGTGAAT
GGCATCGAGC CAACCATCGA AAATATTCGC AATGGAAAAT ATCCTTACAC TATTGATGTA
TATATGGTTT CCGCTGGAAA ACCCTCGCGG CAATCGCAAA AATTTATCGA TTGGTTTTTG
AGCGAGCAAG GGCAAAGGTT GATTGCTGAC GTTGGATACG TTCCTCTGGC GCGCTAA
 
Protein sequence
MAIIKSIKFW LAEIVLLVVV LPILAIIFSI FNIIFNIAGD IYGLIATLMA TILVGCATGG 
IRGRFIDERE RFIPGFLPAL LLIFYSLTVW LIMIIVADGD FESSVFYHGI QWFGLYSALI
KSALMTEFYE ISSSRVIIAP VIPFVGFLSY TIMRFITVRQ NNKLENVTGW RSIVLLIAAM
TIAISGLLSW QTYDRRERRV VNDPAREITE SFEPGTYDPF TPDNKLTALS ASPGLSLEND
WPRLNGATAV YPVYASAAQA LYHNLDVDSV WKYVRCDRTP GAWEKLIHGE ADIIFVAEPS
AEQKASARAQ GVDLHFYPIA REAFVFVTHK DNPLTQLSEK QIRDIYSGRV NNWLEVGGND
ARIYPYQRPK GSGSQTIMLA AVMGEDKLRK PLETESVHDM IGLLRNVANY QNSANALGYT
FRYYATQLHH SPDLRLLAVN GIEPTIENIR NGKYPYTIDV YMVSAGKPSR QSQKFIDWFL
SEQGQRLIAD VGYVPLAR