| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1335 |
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| Symbol | |
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| ID | 6874067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 1310844 |
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| End bp | 1311983 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642784503 |
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| Product | glycosyl hydrolase, family 88 |
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| Protein accession | YP_002215173 |
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| Protein GI | 198242441 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4225] Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.00000103644 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGGTTT ATCCAGTCAA ACACAGTCCG CTATTGCGTC AGCCTGAGCA TTTTATCGCC
AGAGATGAAC TAAAAGCCCT GGTGCAAAAG GTGACGCATA ACCTGGTCAA TATTAAAGAT
GATACAGGCG AATTTTTATT GCGACTGGAC GACGGACGCG TGATCGATAC TAAAGGCTGG
GCCGGATGGG AGTGGACGCA CGGCGTGGGC CTGTACGGAA TGTATCACTA TTACCAACAG
ACCGGCGACC AGACGATGCG TAAGATCATT GATGACTGGT TTGCCGATCG TTTTGCGGAA
GGCGCGACGA CGAAAAACGT TAATACGATG GCGCCGTTTT TAACGCTGGC GTATCGCCAT
GAAGAGACGC GTAATCCAGC GTATTTACCG TGGCTGGAAA CGTGGGCCGA ATGGGCGATG
AATGAAATGC CCCGTACCGA TCACGGCGGA ATGCAGCACA TCACGCTGGC GGAGGAAAAT
CATCAGCAGA TGTGGGACGA CACGCTAATG ATGACGGTGC TGCCGCTGGC GAAAATCGGT
AAGCTGTTGA ACCGGCCGGA ATATGTGGAA GAGGCAACCT ATCAGTTCCT GCTACACGTG
CAGAATTTGA TGGATAAAGA GACGGGGCTG TGGTTCCACG GCTGGAGCTA TGACGGTCAT
CATAACTTCG CTAACGCTCG CTGGGCGCGC GGCAACAGTT GGCTGACCAT TGTGATCCCG
GATTTTCTTG AACTGCTGGA CTTGCCGGAA AATAATGCCG TGCGCCGTTA TCTGGTCCAG
GTACTGAATG CGCAGATCGC CGCGCTGGCG AAATGTCAGG ATGAAAGCGG TTTGTGGCAT
ACGCTGCTTG ACGATCCGCA CTCTTATCTT GAGGCGTCGG CGACGGCGGG TTTTGCCTAC
GGTATTCTTA AAGCGGTGCG CAAACGCTAT GTCGGGCGGC ACTATGCGCA GGTGGCGGAA
AAAGCCATTC GGGGGATAGT GAAACATATC TCGCCGGAAG GCGAACTGCT GCAAACGTCA
TTTGGCACTG GCATGGGCCA CGATCTCGAT TTTTACCGTC ATATTCCGTT GACCTCTATG
CCTTACGGGC AGGCGATGGC TATGCTGTGT TTGACGGAAT ATCTGCGTAA CTATTTCTGA
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| Protein sequence | MMVYPVKHSP LLRQPEHFIA RDELKALVQK VTHNLVNIKD DTGEFLLRLD DGRVIDTKGW
AGWEWTHGVG LYGMYHYYQQ TGDQTMRKII DDWFADRFAE GATTKNVNTM APFLTLAYRH
EETRNPAYLP WLETWAEWAM NEMPRTDHGG MQHITLAEEN HQQMWDDTLM MTVLPLAKIG
KLLNRPEYVE EATYQFLLHV QNLMDKETGL WFHGWSYDGH HNFANARWAR GNSWLTIVIP
DFLELLDLPE NNAVRRYLVQ VLNAQIAALA KCQDESGLWH TLLDDPHSYL EASATAGFAY
GILKAVRKRY VGRHYAQVAE KAIRGIVKHI SPEGELLQTS FGTGMGHDLD FYRHIPLTSM
PYGQAMAMLC LTEYLRNYF
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